Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
CXCL1P09341 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.14□□□□□ -1.75
CXCL1P09341 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CXCL1P09341 HSPD1P9-201ENST00000420325 1636 ntBASIC4.13□□□□□ -1.75
CXCL1P09341 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CXCL1P09341 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.13□□□□□ -1.75
CXCL1P09341 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.13□□□□□ -1.75
CXCL1P09341 AC093225.1-201ENST00000506867 1408 ntBASIC4.13□□□□□ -1.75
CXCL1P09341 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CXCL1P09341 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.13□□□□□ -1.75
CXCL1P09341 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CXCL1P09341 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CXCL1P09341 AC008627.1-201ENST00000517511 1704 ntBASIC4.13□□□□□ -1.75
CXCL1P09341 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.13□□□□□ -1.75
CXCL1P09341 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.13□□□□□ -1.75
CXCL1P09341 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
CXCL1P09341 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.13□□□□□ -1.75
CXCL1P09341 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.13□□□□□ -1.75
CXCL1P09341 Z68694.1-201ENST00000413929 841 ntBASIC4.13□□□□□ -1.75
CXCL1P09341 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC4.13□□□□□ -1.75
CXCL1P09341 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CXCL1P09341 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.13□□□□□ -1.75
CXCL1P09341 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.13□□□□□ -1.75
CXCL1P09341 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.13□□□□□ -1.75
CXCL1P09341 AC073587.1-201ENST00000447093 876 ntBASIC4.13□□□□□ -1.75
CXCL1P09341 AL450023.1-201ENST00000450868 751 ntBASIC4.13□□□□□ -1.75
CXCL1P09341 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CXCL1P09341 RN7SL254P-201ENST00000460609 284 ntBASIC4.13□□□□□ -1.75
CXCL1P09341 AL122020.1-201ENST00000472287 459 ntBASIC4.13□□□□□ -1.75
CXCL1P09341 AC091544.1-201ENST00000484702 348 ntBASIC4.13□□□□□ -1.75
CXCL1P09341 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.13□□□□□ -1.75
CXCL1P09341 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC4.13□□□□□ -1.75
CXCL1P09341 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4.13□□□□□ -1.75
CXCL1P09341 TCP11X3P-202ENST00000514289 1254 ntBASIC4.13□□□□□ -1.75
CXCL1P09341 RNA5SP360-201ENST00000516555 118 ntBASIC4.13□□□□□ -1.75
CXCL1P09341 OR8G3P-201ENST00000533406 921 ntBASIC4.13□□□□□ -1.75
CXCL1P09341 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.13□□□□□ -1.75
CXCL1P09341 OR11H3P-201ENST00000554547 982 ntBASIC4.13□□□□□ -1.75
CXCL1P09341 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.13□□□□□ -1.75
CXCL1P09341 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC4.13□□□□□ -1.75
CXCL1P09341 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC4.13□□□□□ -1.75
CXCL1P09341 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC4.13□□□□□ -1.75
CXCL1P09341 AP005119.1-201ENST00000580956 292 ntBASIC4.13□□□□□ -1.75
CXCL1P09341 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.13□□□□□ -1.75
CXCL1P09341 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC4.13□□□□□ -1.75
CXCL1P09341 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CXCL1P09341 AC073333.2-201ENST00000603589 769 ntBASIC4.13□□□□□ -1.75
CXCL1P09341 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC4.13□□□□□ -1.75
CXCL1P09341 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.13□□□□□ -1.75
CXCL1P09341 uc_338.18-201ENST00000615451 175 ntBASIC4.13□□□□□ -1.75
CXCL1P09341 AC135068.5-201ENST00000624197 983 ntBASIC4.13□□□□□ -1.75
CXCL1P09341 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.13□□□□□ -1.75
CXCL1P09341 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CXCL1P09341 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.13□□□□□ -1.75
CXCL1P09341 AL357140.4-201ENST00000636827 412 ntBASIC4.13□□□□□ -1.75
CXCL1P09341 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CXCL1P09341 AC063976.2-201ENST00000425667 3556 ntBASIC4.13□□□□□ -1.75
CXCL1P09341 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.13□□□□□ -1.75
CXCL1P09341 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CXCL1P09341 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CXCL1P09341 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CXCL1P09341 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CXCL1P09341 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CXCL1P09341 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CXCL1P09341 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CXCL1P09341 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.12□□□□□ -1.75
CXCL1P09341 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
CXCL1P09341 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CXCL1P09341 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CXCL1P09341 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CXCL1P09341 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CXCL1P09341 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CXCL1P09341 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CXCL1P09341 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CXCL1P09341 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.12□□□□□ -1.75
CXCL1P09341 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CXCL1P09341 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CXCL1P09341 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.12□□□□□ -1.75
CXCL1P09341 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.12□□□□□ -1.75
CXCL1P09341 XKRY2-202ENST00000623874 1581 ntBASIC4.12□□□□□ -1.75
CXCL1P09341 XKRY-202ENST00000624960 1581 ntBASIC4.12□□□□□ -1.75
CXCL1P09341 RNU1-94P-201ENST00000362627 173 ntBASIC4.12□□□□□ -1.75
CXCL1P09341 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CXCL1P09341 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC4.12□□□□□ -1.75
CXCL1P09341 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CXCL1P09341 AC002524.1-201ENST00000411687 547 ntBASIC4.12□□□□□ -1.75
CXCL1P09341 AL357752.1-201ENST00000412817 349 ntBASIC4.12□□□□□ -1.75
CXCL1P09341 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC4.12□□□□□ -1.75
CXCL1P09341 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC4.12□□□□□ -1.75
CXCL1P09341 AC004690.1-201ENST00000418216 328 ntBASIC4.12□□□□□ -1.75
CXCL1P09341 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC4.12□□□□□ -1.75
CXCL1P09341 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC4.12□□□□□ -1.75
CXCL1P09341 BX119321.1-201ENST00000428912 797 ntBASIC4.12□□□□□ -1.75
CXCL1P09341 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CXCL1P09341 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC4.12□□□□□ -1.75
CXCL1P09341 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.12□□□□□ -1.75
CXCL1P09341 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CXCL1P09341 RPS6P2-201ENST00000454208 705 ntBASIC4.12□□□□□ -1.75
CXCL1P09341 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC4.12□□□□□ -1.75
CXCL1P09341 RPS17P15-201ENST00000475609 349 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms