Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CAPN1P07384 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.52□□□□□ -1.53
CAPN1P07384 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CAPN1P07384 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CAPN1P07384 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CAPN1P07384 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CAPN1P07384 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.52□□□□□ -1.53
CAPN1P07384 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.52□□□□□ -1.53
CAPN1P07384 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CAPN1P07384 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.51□□□□□ -1.53
CAPN1P07384 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.51□□□□□ -1.53
CAPN1P07384 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CAPN1P07384 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CAPN1P07384 HSPD1P7-201ENST00000447985 1686 ntBASIC5.51□□□□□ -1.53
CAPN1P07384 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.51□□□□□ -1.53
CAPN1P07384 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CAPN1P07384 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CAPN1P07384 RNA5SP46-201ENST00000362370 120 ntBASIC5.51□□□□□ -1.53
CAPN1P07384 RNA5SP326-201ENST00000363209 110 ntBASIC5.51□□□□□ -1.53
CAPN1P07384 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.51□□□□□ -1.53
CAPN1P07384 MIR143-201ENST00000385300 106 ntBASIC5.51□□□□□ -1.53
CAPN1P07384 AC005042.1-201ENST00000393397 800 ntBASIC5.51□□□□□ -1.53
CAPN1P07384 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.51□□□□□ -1.53
CAPN1P07384 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.51□□□□□ -1.53
CAPN1P07384 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.51□□□□□ -1.53
CAPN1P07384 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.51□□□□□ -1.53
CAPN1P07384 LRRC37A14P-201ENST00000452297 462 ntBASIC5.51□□□□□ -1.53
CAPN1P07384 RN7SL197P-201ENST00000466981 299 ntBASIC5.51□□□□□ -1.53
CAPN1P07384 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.51□□□□□ -1.53
CAPN1P07384 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.51□□□□□ -1.53
CAPN1P07384 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.51□□□□□ -1.53
CAPN1P07384 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.51□□□□□ -1.53
CAPN1P07384 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.51□□□□□ -1.53
CAPN1P07384 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.51□□□□□ -1.53
CAPN1P07384 AGGF1P7-201ENST00000562369 913 ntBASIC5.51□□□□□ -1.53
CAPN1P07384 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.51□□□□□ -1.53
CAPN1P07384 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.51□□□□□ -1.53
CAPN1P07384 MIR4260-201ENST00000583107 67 ntBASIC5.51□□□□□ -1.53
CAPN1P07384 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.51□□□□□ -1.53
CAPN1P07384 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.51□□□□□ -1.53
CAPN1P07384 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.51□□□□□ -1.53
CAPN1P07384 AL589674.2-201ENST00000604304 337 ntBASIC5.51□□□□□ -1.53
CAPN1P07384 AC104695.2-201ENST00000605056 775 ntBASIC5.51□□□□□ -1.53
CAPN1P07384 AL022394.1-201ENST00000606979 292 ntBASIC5.51□□□□□ -1.53
CAPN1P07384 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.51□□□□□ -1.53
CAPN1P07384 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.51□□□□□ -1.53
CAPN1P07384 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.51□□□□□ -1.53
CAPN1P07384 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CAPN1P07384 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CAPN1P07384 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
CAPN1P07384 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CAPN1P07384 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CAPN1P07384 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CAPN1P07384 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
CAPN1P07384 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CAPN1P07384 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.5□□□□□ -1.53
CAPN1P07384 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.5□□□□□ -1.53
CAPN1P07384 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
CAPN1P07384 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CAPN1P07384 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.5□□□□□ -1.53
CAPN1P07384 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CAPN1P07384 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CAPN1P07384 AL121886.1-201ENST00000358609 435 ntBASIC5.5□□□□□ -1.53
CAPN1P07384 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CAPN1P07384 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CAPN1P07384 AC007068.1-201ENST00000396690 844 ntBASIC5.5□□□□□ -1.53
CAPN1P07384 BX510359.3-201ENST00000422168 306 ntBASIC5.5□□□□□ -1.53
CAPN1P07384 TMEM183AP1-205ENST00000432739 290 ntBASIC5.5□□□□□ -1.53
CAPN1P07384 HMGB3P24-201ENST00000433260 622 ntBASIC5.5□□□□□ -1.53
CAPN1P07384 MTND2P40-201ENST00000436718 841 ntBASIC5.5□□□□□ -1.53
CAPN1P07384 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.5□□□□□ -1.53
CAPN1P07384 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.5□□□□□ -1.53
CAPN1P07384 AC023271.1-201ENST00000445936 1090 ntBASIC5.5□□□□□ -1.53
CAPN1P07384 AC073909.1-201ENST00000447112 999 ntBASIC5.5□□□□□ -1.53
CAPN1P07384 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.5□□□□□ -1.53
CAPN1P07384 SNORD125-201ENST00000459538 96 ntBASIC5.5□□□□□ -1.53
CAPN1P07384 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
CAPN1P07384 RN7SL570P-201ENST00000484405 292 ntBASIC5.5□□□□□ -1.53
CAPN1P07384 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.5□□□□□ -1.53
CAPN1P07384 RPS17P5-201ENST00000498293 408 ntBASIC5.5□□□□□ -1.53
CAPN1P07384 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
CAPN1P07384 ATP5LP3-201ENST00000514223 304 ntBASIC5.5□□□□□ -1.53
CAPN1P07384 SNORA43.3-201ENST00000517240 103 ntBASIC5.5□□□□□ -1.53
CAPN1P07384 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.5□□□□□ -1.53
CAPN1P07384 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.5□□□□□ -1.53
CAPN1P07384 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.5□□□□□ -1.53
CAPN1P07384 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.5□□□□□ -1.53
CAPN1P07384 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.5□□□□□ -1.53
CAPN1P07384 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.5□□□□□ -1.53
CAPN1P07384 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.5□□□□□ -1.53
CAPN1P07384 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.5□□□□□ -1.53
CAPN1P07384 MIR4505-201ENST00000582238 73 ntBASIC5.5□□□□□ -1.53
CAPN1P07384 AC007448.1-201ENST00000582714 234 ntBASIC5.5□□□□□ -1.53
CAPN1P07384 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.5□□□□□ -1.53
CAPN1P07384 FO393422.1-201ENST00000603908 708 ntBASIC5.5□□□□□ -1.53
CAPN1P07384 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CAPN1P07384 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.5□□□□□ -1.53
CAPN1P07384 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
CAPN1P07384 AC087565.3-203ENST00000641018 837 ntBASIC5.5□□□□□ -1.53
CAPN1P07384 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms