Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.16□□□□□ -1.58
MT-ND1P03886 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.16□□□□□ -1.58
MT-ND1P03886 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.16□□□□□ -1.58
MT-ND1P03886 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
MT-ND1P03886 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.16□□□□□ -1.58
MT-ND1P03886 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.16□□□□□ -1.58
MT-ND1P03886 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
MT-ND1P03886 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
MT-ND1P03886 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
MT-ND1P03886 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.16□□□□□ -1.58
MT-ND1P03886 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.16□□□□□ -1.58
MT-ND1P03886 AC106901.1-201ENST00000425086 698 ntBASIC5.16□□□□□ -1.58
MT-ND1P03886 MGAT2P2-201ENST00000427194 797 ntBASIC5.16□□□□□ -1.58
MT-ND1P03886 AC007679.3-201ENST00000434035 414 ntBASIC5.16□□□□□ -1.58
MT-ND1P03886 AMYP1-201ENST00000440059 1023 ntBASIC5.16□□□□□ -1.58
MT-ND1P03886 AL596266.1-201ENST00000448132 400 ntBASIC5.16□□□□□ -1.58
MT-ND1P03886 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.16□□□□□ -1.58
MT-ND1P03886 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC5.16□□□□□ -1.58
MT-ND1P03886 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.16□□□□□ -1.58
MT-ND1P03886 GAPDHP14-201ENST00000450472 937 ntBASIC5.16□□□□□ -1.58
MT-ND1P03886 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.16□□□□□ -1.58
MT-ND1P03886 AC104339.1-201ENST00000465478 348 ntBASIC5.16□□□□□ -1.58
MT-ND1P03886 RPSAP37-201ENST00000470913 821 ntBASIC5.16□□□□□ -1.58
MT-ND1P03886 RPS17P15-201ENST00000475609 349 ntBASIC5.16□□□□□ -1.58
MT-ND1P03886 RPL9P15-201ENST00000491096 532 ntBASIC5.16□□□□□ -1.58
MT-ND1P03886 AC009120.1-201ENST00000493458 473 ntBASIC5.16□□□□□ -1.58
MT-ND1P03886 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
MT-ND1P03886 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.16□□□□□ -1.58
MT-ND1P03886 AC092349.1-201ENST00000504903 310 ntBASIC5.16□□□□□ -1.58
MT-ND1P03886 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.16□□□□□ -1.58
MT-ND1P03886 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.16□□□□□ -1.58
MT-ND1P03886 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
MT-ND1P03886 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.16□□□□□ -1.58
MT-ND1P03886 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.16□□□□□ -1.58
MT-ND1P03886 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.16□□□□□ -1.58
MT-ND1P03886 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.16□□□□□ -1.58
MT-ND1P03886 AC079905.1-201ENST00000549280 475 ntBASIC5.16□□□□□ -1.58
MT-ND1P03886 NMNAT1P5-201ENST00000559657 841 ntBASIC5.16□□□□□ -1.58
MT-ND1P03886 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC5.16□□□□□ -1.58
MT-ND1P03886 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.16□□□□□ -1.58
MT-ND1P03886 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.16□□□□□ -1.58
MT-ND1P03886 PRPF19P1-201ENST00000584766 898 ntBASIC5.16□□□□□ -1.58
MT-ND1P03886 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.16□□□□□ -1.58
MT-ND1P03886 AP000769.2-201ENST00000602344 396 ntBASIC5.16□□□□□ -1.58
MT-ND1P03886 FAM27E4-201ENST00000605259 342 ntBASIC5.16□□□□□ -1.58
MT-ND1P03886 AL591926.1-201ENST00000620542 217 ntBASIC5.16□□□□□ -1.58
MT-ND1P03886 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
MT-ND1P03886 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.16□□□□□ -1.58
MT-ND1P03886 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
MT-ND1P03886 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.16□□□□□ -1.58
MT-ND1P03886 AL353796.1-201ENST00000561542 3241 ntBASIC5.16□□□□□ -1.58
MT-ND1P03886 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
MT-ND1P03886 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
MT-ND1P03886 AC125336.1-201ENST00000508893 2827 ntBASIC5.15□□□□□ -1.58
MT-ND1P03886 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
MT-ND1P03886 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.15□□□□□ -1.58
MT-ND1P03886 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
MT-ND1P03886 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.15□□□□□ -1.58
MT-ND1P03886 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.15□□□□□ -1.58
MT-ND1P03886 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
MT-ND1P03886 AC004817.4-201ENST00000602396 3625 ntBASIC5.15□□□□□ -1.58
MT-ND1P03886 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.58
MT-ND1P03886 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.15□□□□□ -1.58
MT-ND1P03886 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
MT-ND1P03886 AC068870.3-201ENST00000625077 2536 ntBASIC5.15□□□□□ -1.58
MT-ND1P03886 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
MT-ND1P03886 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
MT-ND1P03886 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
MT-ND1P03886 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
MT-ND1P03886 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
MT-ND1P03886 RNA5SP30-201ENST00000365552 115 ntBASIC5.15□□□□□ -1.59
MT-ND1P03886 AC007618.1-201ENST00000366455 732 ntBASIC5.15□□□□□ -1.59
MT-ND1P03886 GAPDHP15-201ENST00000398586 975 ntBASIC5.15□□□□□ -1.59
MT-ND1P03886 RNA5SP431-201ENST00000410312 120 ntBASIC5.15□□□□□ -1.59
MT-ND1P03886 RPL12P9-201ENST00000412942 488 ntBASIC5.15□□□□□ -1.59
MT-ND1P03886 AK4P4-201ENST00000419465 646 ntBASIC5.15□□□□□ -1.59
MT-ND1P03886 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.15□□□□□ -1.59
MT-ND1P03886 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.15□□□□□ -1.59
MT-ND1P03886 CLNS1AP1-201ENST00000435954 682 ntBASIC5.15□□□□□ -1.59
MT-ND1P03886 NDUFS5P5-201ENST00000437256 321 ntBASIC5.15□□□□□ -1.59
MT-ND1P03886 OR6C72P-201ENST00000451403 892 ntBASIC5.15□□□□□ -1.59
MT-ND1P03886 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.15□□□□□ -1.59
MT-ND1P03886 RPL12P24-201ENST00000474907 486 ntBASIC5.15□□□□□ -1.59
MT-ND1P03886 AL117692.1-201ENST00000494283 713 ntBASIC5.15□□□□□ -1.59
MT-ND1P03886 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
MT-ND1P03886 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.15□□□□□ -1.59
MT-ND1P03886 SCARNA6.1-201ENST00000516989 238 ntBASIC5.15□□□□□ -1.59
MT-ND1P03886 RN7SKP183-201ENST00000517169 324 ntBASIC5.15□□□□□ -1.59
MT-ND1P03886 AC021678.3-201ENST00000517893 476 ntBASIC5.15□□□□□ -1.59
MT-ND1P03886 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.15□□□□□ -1.59
MT-ND1P03886 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.15□□□□□ -1.59
MT-ND1P03886 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.15□□□□□ -1.59
MT-ND1P03886 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.15□□□□□ -1.59
MT-ND1P03886 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.15□□□□□ -1.59
MT-ND1P03886 AC006512.2-201ENST00000543250 486 ntBASIC5.15□□□□□ -1.59
MT-ND1P03886 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.15□□□□□ -1.59
MT-ND1P03886 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.15□□□□□ -1.59
MT-ND1P03886 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.15□□□□□ -1.59
MT-ND1P03886 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
MT-ND1P03886 MIR4311-201ENST00000580794 100 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms