Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
GPC4O75487 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
GPC4O75487 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.68□□□□□ -1.5
GPC4O75487 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.68□□□□□ -1.5
GPC4O75487 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.68□□□□□ -1.5
GPC4O75487 MTHFD2P5-201ENST00000320415 844 ntBASIC5.68□□□□□ -1.5
GPC4O75487 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
GPC4O75487 AMZ2P2-201ENST00000406819 1057 ntBASIC5.68□□□□□ -1.5
GPC4O75487 RNGTTP1-201ENST00000420965 728 ntBASIC5.68□□□□□ -1.5
GPC4O75487 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.68□□□□□ -1.5
GPC4O75487 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.68□□□□□ -1.5
GPC4O75487 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
GPC4O75487 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.68□□□□□ -1.5
GPC4O75487 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.68□□□□□ -1.5
GPC4O75487 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.68□□□□□ -1.5
GPC4O75487 PCNPP2-201ENST00000441651 455 ntBASIC5.68□□□□□ -1.5
GPC4O75487 HLA-DPA3-207ENST00000454398 229 ntBASIC5.68□□□□□ -1.5
GPC4O75487 ACA64.1-201ENST00000459171 127 ntBASIC5.68□□□□□ -1.5
GPC4O75487 NDUFA5P5-201ENST00000468361 342 ntBASIC5.68□□□□□ -1.5
GPC4O75487 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
GPC4O75487 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
GPC4O75487 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.68□□□□□ -1.5
GPC4O75487 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.68□□□□□ -1.5
GPC4O75487 AK4P6-201ENST00000505168 528 ntBASIC5.68□□□□□ -1.5
GPC4O75487 AC105384.2-201ENST00000508433 640 ntBASIC5.68□□□□□ -1.5
GPC4O75487 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.68□□□□□ -1.5
GPC4O75487 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.68□□□□□ -1.5
GPC4O75487 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.68□□□□□ -1.5
GPC4O75487 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
GPC4O75487 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.68□□□□□ -1.5
GPC4O75487 AC008147.3-201ENST00000548666 354 ntBASIC5.68□□□□□ -1.5
GPC4O75487 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.68□□□□□ -1.5
GPC4O75487 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.68□□□□□ -1.5
GPC4O75487 AC005726.4-201ENST00000582858 458 ntBASIC5.68□□□□□ -1.5
GPC4O75487 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.68□□□□□ -1.5
GPC4O75487 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.68□□□□□ -1.5
GPC4O75487 AC012213.4-201ENST00000606457 354 ntBASIC5.68□□□□□ -1.5
GPC4O75487 AL365181.4-201ENST00000609800 547 ntBASIC5.68□□□□□ -1.5
GPC4O75487 Z95327.3-201ENST00000610385 572 ntBASIC5.68□□□□□ -1.5
GPC4O75487 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
GPC4O75487 WBP1LP8-201ENST00000617401 327 ntBASIC5.68□□□□□ -1.5
GPC4O75487 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
GPC4O75487 AL359742.1-201ENST00000622497 540 ntBASIC5.68□□□□□ -1.5
GPC4O75487 LINC00216-201ENST00000623548 1126 ntBASIC5.68□□□□□ -1.5
GPC4O75487 AL356094.1-201ENST00000624663 1212 ntBASIC5.68□□□□□ -1.5
GPC4O75487 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
GPC4O75487 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.68□□□□□ -1.5
GPC4O75487 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
GPC4O75487 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
GPC4O75487 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
GPC4O75487 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
GPC4O75487 MTCO1P7-201ENST00000419523 1542 ntBASIC5.68□□□□□ -1.5
GPC4O75487 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
GPC4O75487 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
GPC4O75487 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.68□□□□□ -1.5
GPC4O75487 MTND4P21-201ENST00000453886 1357 ntBASIC5.67□□□□□ -1.5
GPC4O75487 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
GPC4O75487 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
GPC4O75487 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.67□□□□□ -1.5
GPC4O75487 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.67□□□□□ -1.5
GPC4O75487 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
GPC4O75487 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
GPC4O75487 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
GPC4O75487 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.67□□□□□ -1.5
GPC4O75487 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.67□□□□□ -1.5
GPC4O75487 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
GPC4O75487 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
GPC4O75487 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
GPC4O75487 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
GPC4O75487 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.67□□□□□ -1.5
GPC4O75487 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
GPC4O75487 MIR421-201ENST00000365696 85 ntBASIC5.67□□□□□ -1.5
GPC4O75487 RNU6-883P-201ENST00000384597 107 ntBASIC5.67□□□□□ -1.5
GPC4O75487 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
GPC4O75487 LYPLA1P3-201ENST00000402650 695 ntBASIC5.67□□□□□ -1.5
GPC4O75487 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.67□□□□□ -1.5
GPC4O75487 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.67□□□□□ -1.5
GPC4O75487 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.67□□□□□ -1.5
GPC4O75487 AL357752.1-201ENST00000412817 349 ntBASIC5.67□□□□□ -1.5
GPC4O75487 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.67□□□□□ -1.5
GPC4O75487 AL034379.1-201ENST00000423216 253 ntBASIC5.67□□□□□ -1.5
GPC4O75487 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.67□□□□□ -1.5
GPC4O75487 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.67□□□□□ -1.5
GPC4O75487 AC242426.1-201ENST00000435270 960 ntBASIC5.67□□□□□ -1.5
GPC4O75487 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.67□□□□□ -1.5
GPC4O75487 AL138899.2-201ENST00000439139 499 ntBASIC5.67□□□□□ -1.5
GPC4O75487 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.67□□□□□ -1.5
GPC4O75487 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.67□□□□□ -1.5
GPC4O75487 AC023271.1-201ENST00000445936 1090 ntBASIC5.67□□□□□ -1.5
GPC4O75487 RAB28P3-201ENST00000448325 597 ntBASIC5.67□□□□□ -1.5
GPC4O75487 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.67□□□□□ -1.5
GPC4O75487 MEMO1P4-201ENST00000453590 386 ntBASIC5.67□□□□□ -1.5
GPC4O75487 ABCC13-202ENST00000463099 3842 ntBASIC5.67□□□□□ -1.5
GPC4O75487 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.67□□□□□ -1.5
GPC4O75487 AC011476.1-201ENST00000466725 307 ntBASIC5.67□□□□□ -1.5
GPC4O75487 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
GPC4O75487 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.67□□□□□ -1.5
GPC4O75487 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.67□□□□□ -1.5
GPC4O75487 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.67□□□□□ -1.5
GPC4O75487 AC006499.4-201ENST00000510947 694 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms