Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ZIC3O60481 FRG2FP-204ENST00000453982 852 ntBASIC5.22□□□□□ -1.57
ZIC3O60481 MTATP6P14-201ENST00000455189 673 ntBASIC5.22□□□□□ -1.57
ZIC3O60481 RPS23P6-201ENST00000466136 431 ntBASIC5.22□□□□□ -1.57
ZIC3O60481 NPM1P17-201ENST00000479221 602 ntBASIC5.22□□□□□ -1.57
ZIC3O60481 AC079080.1-201ENST00000479841 822 ntBASIC5.22□□□□□ -1.57
ZIC3O60481 RN7SL570P-201ENST00000484405 292 ntBASIC5.22□□□□□ -1.57
ZIC3O60481 RPL32P33-201ENST00000487023 394 ntBASIC5.22□□□□□ -1.57
ZIC3O60481 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.22□□□□□ -1.57
ZIC3O60481 RPEP1-201ENST00000504507 658 ntBASIC5.22□□□□□ -1.57
ZIC3O60481 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.22□□□□□ -1.57
ZIC3O60481 CYCSP22-201ENST00000517555 339 ntBASIC5.22□□□□□ -1.57
ZIC3O60481 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.22□□□□□ -1.57
ZIC3O60481 C1DP5-201ENST00000525775 383 ntBASIC5.22□□□□□ -1.57
ZIC3O60481 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.22□□□□□ -1.57
ZIC3O60481 OR4A6P-201ENST00000534364 970 ntBASIC5.22□□□□□ -1.57
ZIC3O60481 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.22□□□□□ -1.57
ZIC3O60481 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.22□□□□□ -1.57
ZIC3O60481 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.22□□□□□ -1.57
ZIC3O60481 AC063977.5-201ENST00000601044 974 ntBASIC5.22□□□□□ -1.57
ZIC3O60481 AP004372.1-201ENST00000604842 844 ntBASIC5.22□□□□□ -1.57
ZIC3O60481 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
ZIC3O60481 AC015722.2-201ENST00000622210 551 ntBASIC5.22□□□□□ -1.57
ZIC3O60481 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
ZIC3O60481 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ZIC3O60481 NCOA4P2-201ENST00000340589 1813 ntBASIC5.22□□□□□ -1.57
ZIC3O60481 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ZIC3O60481 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ZIC3O60481 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ZIC3O60481 CASC19-261ENST00000641853 1638 ntBASIC5.22□□□□□ -1.57
ZIC3O60481 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.22□□□□□ -1.57
ZIC3O60481 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ZIC3O60481 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ZIC3O60481 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
ZIC3O60481 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ZIC3O60481 AP000547.3-204ENST00000588548 2523 ntBASIC5.22□□□□□ -1.57
ZIC3O60481 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ZIC3O60481 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ZIC3O60481 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.57
ZIC3O60481 KARSP1-201ENST00000451871 1752 ntBASIC5.21□□□□□ -1.57
ZIC3O60481 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
ZIC3O60481 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
ZIC3O60481 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
ZIC3O60481 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
ZIC3O60481 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.57
ZIC3O60481 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
ZIC3O60481 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.21□□□□□ -1.57
ZIC3O60481 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.21□□□□□ -1.57
ZIC3O60481 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
ZIC3O60481 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
ZIC3O60481 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
ZIC3O60481 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ZIC3O60481 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ZIC3O60481 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ZIC3O60481 TMSB4XP4-201ENST00000323496 618 ntBASIC5.21□□□□□ -1.58
ZIC3O60481 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ZIC3O60481 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.21□□□□□ -1.58
ZIC3O60481 NIFKP3-201ENST00000417799 865 ntBASIC5.21□□□□□ -1.58
ZIC3O60481 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
ZIC3O60481 MTCYBP32-201ENST00000427945 1084 ntBASIC5.21□□□□□ -1.58
ZIC3O60481 AL512661.1-201ENST00000434586 1253 ntBASIC5.21□□□□□ -1.58
ZIC3O60481 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.21□□□□□ -1.58
ZIC3O60481 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.21□□□□□ -1.58
ZIC3O60481 LRRC37A14P-201ENST00000452297 462 ntBASIC5.21□□□□□ -1.58
ZIC3O60481 SETP20-201ENST00000457046 852 ntBASIC5.21□□□□□ -1.58
ZIC3O60481 RPS27AP2-201ENST00000457576 465 ntBASIC5.21□□□□□ -1.58
ZIC3O60481 NXT1P1-201ENST00000458481 316 ntBASIC5.21□□□□□ -1.58
ZIC3O60481 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.21□□□□□ -1.58
ZIC3O60481 RN7SL273P-201ENST00000481561 299 ntBASIC5.21□□□□□ -1.58
ZIC3O60481 AC022215.1-201ENST00000481770 362 ntBASIC5.21□□□□□ -1.58
ZIC3O60481 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.21□□□□□ -1.58
ZIC3O60481 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
ZIC3O60481 RPL7P51-201ENST00000490532 749 ntBASIC5.21□□□□□ -1.58
ZIC3O60481 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.21□□□□□ -1.58
ZIC3O60481 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
ZIC3O60481 AC021087.2-201ENST00000504656 1203 ntBASIC5.21□□□□□ -1.58
ZIC3O60481 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
ZIC3O60481 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.21□□□□□ -1.58
ZIC3O60481 AC074255.1-201ENST00000511259 501 ntBASIC5.21□□□□□ -1.58
ZIC3O60481 AC110760.3-202ENST00000515177 371 ntBASIC5.21□□□□□ -1.58
ZIC3O60481 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.21□□□□□ -1.58
ZIC3O60481 SOX5P1-201ENST00000524155 1127 ntBASIC5.21□□□□□ -1.58
ZIC3O60481 HMGB1P42-201ENST00000532126 553 ntBASIC5.21□□□□□ -1.58
ZIC3O60481 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC5.21□□□□□ -1.58
ZIC3O60481 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.21□□□□□ -1.58
ZIC3O60481 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.21□□□□□ -1.58
ZIC3O60481 AC126615.2-201ENST00000553003 515 ntBASIC5.21□□□□□ -1.58
ZIC3O60481 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC5.21□□□□□ -1.58
ZIC3O60481 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.21□□□□□ -1.58
ZIC3O60481 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.21□□□□□ -1.58
ZIC3O60481 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.21□□□□□ -1.58
ZIC3O60481 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.21□□□□□ -1.58
ZIC3O60481 AC005021.1-201ENST00000608730 355 ntBASIC5.21□□□□□ -1.58
ZIC3O60481 MIR8084-201ENST00000614105 89 ntBASIC5.21□□□□□ -1.58
ZIC3O60481 AC018926.1-201ENST00000616335 435 ntBASIC5.21□□□□□ -1.58
ZIC3O60481 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.21□□□□□ -1.58
ZIC3O60481 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC5.21□□□□□ -1.58
ZIC3O60481 AC087565.3-203ENST00000641018 837 ntBASIC5.21□□□□□ -1.58
ZIC3O60481 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
ZIC3O60481 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms