Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC6.26□□□□□ -1.41
FOXN3O00409 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.26□□□□□ -1.41
FOXN3O00409 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC6.26□□□□□ -1.41
FOXN3O00409 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC6.26□□□□□ -1.41
FOXN3O00409 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
FOXN3O00409 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.26□□□□□ -1.41
FOXN3O00409 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
FOXN3O00409 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.26□□□□□ -1.41
FOXN3O00409 BTG4P1-201ENST00000510421 183 ntBASIC6.26□□□□□ -1.41
FOXN3O00409 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
FOXN3O00409 AC006512.2-201ENST00000543250 486 ntBASIC6.26□□□□□ -1.41
FOXN3O00409 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.26□□□□□ -1.41
FOXN3O00409 AC006530.1-201ENST00000555980 571 ntBASIC6.26□□□□□ -1.41
FOXN3O00409 AL163952.1-202ENST00000569625 600 ntBASIC6.26□□□□□ -1.41
FOXN3O00409 MIR4776-2-201ENST00000580204 80 ntBASIC6.26□□□□□ -1.41
FOXN3O00409 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.26□□□□□ -1.41
FOXN3O00409 AP001357.1-201ENST00000586304 1053 ntBASIC6.26□□□□□ -1.41
FOXN3O00409 AC060780.2-201ENST00000589047 198 ntBASIC6.26□□□□□ -1.41
FOXN3O00409 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.26□□□□□ -1.41
FOXN3O00409 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
FOXN3O00409 AC104763.3-201ENST00000613765 618 ntBASIC6.26□□□□□ -1.41
FOXN3O00409 AL139099.4-201ENST00000614802 114 ntBASIC6.26□□□□□ -1.41
FOXN3O00409 AC245014.3-201ENST00000618589 347 ntBASIC6.26□□□□□ -1.41
FOXN3O00409 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
FOXN3O00409 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.26□□□□□ -1.41
FOXN3O00409 AL356118.1-201ENST00000635272 1078 ntBASIC6.26□□□□□ -1.41
FOXN3O00409 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
FOXN3O00409 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
FOXN3O00409 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.26□□□□□ -1.41
FOXN3O00409 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
FOXN3O00409 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.26□□□□□ -1.41
FOXN3O00409 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
FOXN3O00409 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
FOXN3O00409 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
FOXN3O00409 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
FOXN3O00409 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.25□□□□□ -1.41
FOXN3O00409 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
FOXN3O00409 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
FOXN3O00409 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.25□□□□□ -1.41
FOXN3O00409 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
FOXN3O00409 AC016739.1-201ENST00000405359 345 ntBASIC6.25□□□□□ -1.41
FOXN3O00409 GAPDHP48-201ENST00000436626 961 ntBASIC6.25□□□□□ -1.41
FOXN3O00409 PA2G4P6-201ENST00000438325 1197 ntBASIC6.25□□□□□ -1.41
FOXN3O00409 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.25□□□□□ -1.41
FOXN3O00409 RPL7P55-201ENST00000450522 746 ntBASIC6.25□□□□□ -1.41
FOXN3O00409 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC6.25□□□□□ -1.41
FOXN3O00409 RPL32P14-201ENST00000463196 378 ntBASIC6.25□□□□□ -1.41
FOXN3O00409 PDCL3P4-201ENST00000489621 720 ntBASIC6.25□□□□□ -1.41
FOXN3O00409 TPT1P8-201ENST00000510120 555 ntBASIC6.25□□□□□ -1.41
FOXN3O00409 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.25□□□□□ -1.41
FOXN3O00409 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC6.25□□□□□ -1.41
FOXN3O00409 IGLV3-30-201ENST00000524362 298 ntBASIC6.25□□□□□ -1.41
FOXN3O00409 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.25□□□□□ -1.41
FOXN3O00409 CD69-203ENST00000536709 1020 ntTSL 2 BASIC6.25□□□□□ -1.41
FOXN3O00409 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.25□□□□□ -1.41
FOXN3O00409 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.25□□□□□ -1.41
FOXN3O00409 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC6.25□□□□□ -1.41
FOXN3O00409 AC079905.1-201ENST00000549280 475 ntBASIC6.25□□□□□ -1.41
FOXN3O00409 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.25□□□□□ -1.41
FOXN3O00409 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.25□□□□□ -1.41
FOXN3O00409 AC026826.3-201ENST00000561747 158 ntBASIC6.25□□□□□ -1.41
FOXN3O00409 AC021483.2-201ENST00000567415 758 ntBASIC6.25□□□□□ -1.41
FOXN3O00409 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.25□□□□□ -1.41
FOXN3O00409 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC6.25□□□□□ -1.41
FOXN3O00409 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.25□□□□□ -1.41
FOXN3O00409 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC6.25□□□□□ -1.41
FOXN3O00409 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.25□□□□□ -1.41
FOXN3O00409 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.25□□□□□ -1.41
FOXN3O00409 AC009779.8-202ENST00000607990 932 ntBASIC6.25□□□□□ -1.41
FOXN3O00409 AF129408.1-201ENST00000608767 431 ntBASIC6.25□□□□□ -1.41
FOXN3O00409 MIR6780B-201ENST00000610307 79 ntBASIC6.25□□□□□ -1.41
FOXN3O00409 AC005156.1-201ENST00000613371 573 ntBASIC6.25□□□□□ -1.41
FOXN3O00409 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC6.25□□□□□ -1.41
FOXN3O00409 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.25□□□□□ -1.41
FOXN3O00409 AL596275.2-207ENST00000641188 675 ntBASIC6.25□□□□□ -1.41
FOXN3O00409 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.25□□□□□ -1.41
FOXN3O00409 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
FOXN3O00409 AC245100.2-201ENST00000454544 1679 ntBASIC6.25□□□□□ -1.41
FOXN3O00409 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
FOXN3O00409 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
FOXN3O00409 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
FOXN3O00409 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
FOXN3O00409 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.25□□□□□ -1.41
FOXN3O00409 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
FOXN3O00409 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
FOXN3O00409 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
FOXN3O00409 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
FOXN3O00409 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
FOXN3O00409 LINC02019-201ENST00000608605 2060 ntBASIC6.24□□□□□ -1.41
FOXN3O00409 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
FOXN3O00409 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
FOXN3O00409 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
FOXN3O00409 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.24□□□□□ -1.41
FOXN3O00409 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
FOXN3O00409 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.24□□□□□ -1.41
FOXN3O00409 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
FOXN3O00409 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
FOXN3O00409 RNA5SP91-201ENST00000390902 119 ntBASIC6.24□□□□□ -1.41
FOXN3O00409 AL034403.1-201ENST00000399414 885 ntBASIC6.24□□□□□ -1.41
FOXN3O00409 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms