Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 SAMMSON-213ENST00000641336 1521 ntBASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 MIR133A2-201ENST00000347538 102 ntBASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 CRIP1P1-201ENST00000427567 185 ntBASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 FMO7P-201ENST00000436045 768 ntBASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 FRG2FP-204ENST00000453982 852 ntBASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 AC239798.3-201ENST00000454459 408 ntBASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 SIAH1P1-201ENST00000479411 923 ntBASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 AC009120.1-201ENST00000493458 473 ntBASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 AC078899.1-201ENST00000521432 1185 ntBASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 AC025857.1-201ENST00000525252 377 ntBASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 HNRNPRP2-201ENST00000528421 743 ntBASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 NPM1P42-201ENST00000560329 862 ntBASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 DPPA2P4-201ENST00000563717 878 ntBASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 AL513327.3-201ENST00000602618 469 ntBASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 AL133481.2-203ENST00000607558 139 ntBASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 AL122125.1-201ENST00000616999 600 ntBASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 AC114786.1-201ENST00000512892 1415 ntBASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 RN7SKP124-201ENST00000364730 341 ntBASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 AL596448.1-201ENST00000415024 392 ntBASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 PTP4A1P1-201ENST00000420539 515 ntBASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 SETP10-201ENST00000424368 814 ntBASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 VN1R21P-201ENST00000426703 765 ntBASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 RSU1P1-201ENST00000453416 441 ntBASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 AC087672.1-201ENST00000479876 766 ntBASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 MORF4L2P1-201ENST00000503761 858 ntBASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 AC105384.2-201ENST00000508433 640 ntBASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 FTH1P11-201ENST00000517577 551 ntBASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 AC139365.2-201ENST00000517972 253 ntBASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 AC027308.1-201ENST00000517993 110 ntBASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 IGLV2-28-201ENST00000520681 304 ntBASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 IGKV2-18-201ENST00000522607 343 ntBASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 MRPS16P1-201ENST00000523462 412 ntBASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 TRAV11-201ENST00000539512 339 ntBASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 CU639417.4-201ENST00000623928 207 ntBASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 AC007683.2-201ENST00000624681 714 ntBASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 AC144833.1-201ENST00000567953 4089 ntBASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 CR788268.1-201ENST00000603931 1809 ntBASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 AP000473.2-201ENST00000602659 1537 ntBASIC5.18□□□□□ -1.58
NPIPA2E9PIF3 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms