Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 OR4A46P-201ENST00000527255 933 ntBASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 MIR3691-201ENST00000578066 90 ntBASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 AC005252.1-201ENST00000604518 1063 ntBASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 AL445222.1-201ENST00000607259 628 ntBASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 RPSAP73-201ENST00000614820 330 ntBASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 MIR7155-201ENST00000615925 56 ntBASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 AC005618.4-201ENST00000625053 554 ntBASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 AC000095.2-202ENST00000637415 154 ntBASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 AC114774.1-201ENST00000507410 1770 ntBASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.75□□□□□ -1.49
SMIM28A0A1B0GU29 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.74□□□□□ -1.49
SMIM28A0A1B0GU29 CR383656.5-201ENST00000547616 1340 ntBASIC5.74□□□□□ -1.49
SMIM28A0A1B0GU29 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SMIM28A0A1B0GU29 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SMIM28A0A1B0GU29 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
SMIM28A0A1B0GU29 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SMIM28A0A1B0GU29 AC003973.3-201ENST00000624863 2822 ntBASIC5.74□□□□□ -1.49
SMIM28A0A1B0GU29 RN7SKP185-201ENST00000362813 326 ntBASIC5.74□□□□□ -1.49
SMIM28A0A1B0GU29 RNU1-146P-201ENST00000364015 165 ntBASIC5.74□□□□□ -1.49
SMIM28A0A1B0GU29 MIR105-1-201ENST00000385222 81 ntBASIC5.74□□□□□ -1.49
SMIM28A0A1B0GU29 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.74□□□□□ -1.49
SMIM28A0A1B0GU29 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.74□□□□□ -1.49
SMIM28A0A1B0GU29 AC007394.1-201ENST00000421941 531 ntBASIC5.74□□□□□ -1.49
SMIM28A0A1B0GU29 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.74□□□□□ -1.49
SMIM28A0A1B0GU29 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.74□□□□□ -1.49
SMIM28A0A1B0GU29 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SMIM28A0A1B0GU29 GAPDHP58-201ENST00000438477 1006 ntBASIC5.74□□□□□ -1.49
SMIM28A0A1B0GU29 RPSAP50-201ENST00000481955 852 ntBASIC5.74□□□□□ -1.49
SMIM28A0A1B0GU29 RPL32P9-201ENST00000487963 407 ntBASIC5.74□□□□□ -1.49
SMIM28A0A1B0GU29 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.74□□□□□ -1.49
SMIM28A0A1B0GU29 RN7SL808P-201ENST00000496066 299 ntBASIC5.74□□□□□ -1.49
SMIM28A0A1B0GU29 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.74□□□□□ -1.49
SMIM28A0A1B0GU29 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
SMIM28A0A1B0GU29 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.74□□□□□ -1.49
SMIM28A0A1B0GU29 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.74□□□□□ -1.49
SMIM28A0A1B0GU29 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.74□□□□□ -1.49
SMIM28A0A1B0GU29 AC009027.1-201ENST00000604510 479 ntBASIC5.74□□□□□ -1.49
SMIM28A0A1B0GU29 AC244107.2-201ENST00000611773 76 ntBASIC5.74□□□□□ -1.49
SMIM28A0A1B0GU29 AC037198.3-201ENST00000616754 526 ntBASIC5.74□□□□□ -1.49
SMIM28A0A1B0GU29 AP003400.3-201ENST00000624904 346 ntBASIC5.74□□□□□ -1.49
SMIM28A0A1B0GU29 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.74□□□□□ -1.49
SMIM28A0A1B0GU29 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.74□□□□□ -1.49
SMIM28A0A1B0GU29 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.74□□□□□ -1.49
SMIM28A0A1B0GU29 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SMIM28A0A1B0GU29 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
SMIM28A0A1B0GU29 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.74□□□□□ -1.49
SMIM28A0A1B0GU29 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SMIM28A0A1B0GU29 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
SMIM28A0A1B0GU29 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SMIM28A0A1B0GU29 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SMIM28A0A1B0GU29 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.73□□□□□ -1.49
SMIM28A0A1B0GU29 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
SMIM28A0A1B0GU29 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.73□□□□□ -1.49
SMIM28A0A1B0GU29 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.73□□□□□ -1.49
SMIM28A0A1B0GU29 SNORA17.1-201ENST00000362945 126 ntBASIC5.73□□□□□ -1.49
SMIM28A0A1B0GU29 RNA5SP507-201ENST00000363603 121 ntBASIC5.73□□□□□ -1.49
SMIM28A0A1B0GU29 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
SMIM28A0A1B0GU29 RNU1-106P-201ENST00000384382 164 ntBASIC5.73□□□□□ -1.49
SMIM28A0A1B0GU29 Z92846.1-201ENST00000456203 268 ntBASIC5.73□□□□□ -1.49
SMIM28A0A1B0GU29 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.73□□□□□ -1.49
SMIM28A0A1B0GU29 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.73□□□□□ -1.49
SMIM28A0A1B0GU29 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.73□□□□□ -1.49
SMIM28A0A1B0GU29 OR8Q1P-201ENST00000526467 655 ntBASIC5.73□□□□□ -1.49
SMIM28A0A1B0GU29 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.73□□□□□ -1.49
SMIM28A0A1B0GU29 HMGN2P6-201ENST00000551091 273 ntBASIC5.73□□□□□ -1.49
SMIM28A0A1B0GU29 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.73□□□□□ -1.49
SMIM28A0A1B0GU29 AC007159.1-201ENST00000566529 4706 ntBASIC5.73□□□□□ -1.49
SMIM28A0A1B0GU29 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SMIM28A0A1B0GU29 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SMIM28A0A1B0GU29 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SMIM28A0A1B0GU29 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SMIM28A0A1B0GU29 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SMIM28A0A1B0GU29 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SMIM28A0A1B0GU29 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
SMIM28A0A1B0GU29 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SMIM28A0A1B0GU29 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.72□□□□□ -1.49
SMIM28A0A1B0GU29 SNORA74A-201ENST00000364089 198 ntBASIC5.72□□□□□ -1.49
SMIM28A0A1B0GU29 AL645927.1-201ENST00000396783 406 ntBASIC5.72□□□□□ -1.49
SMIM28A0A1B0GU29 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SMIM28A0A1B0GU29 U3.36-201ENST00000408418 213 ntBASIC5.72□□□□□ -1.49
SMIM28A0A1B0GU29 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.72□□□□□ -1.49
SMIM28A0A1B0GU29 TRGV5P-201ENST00000419915 354 ntBASIC5.72□□□□□ -1.49
SMIM28A0A1B0GU29 AC009127.1-201ENST00000467090 155 ntBASIC5.72□□□□□ -1.49
SMIM28A0A1B0GU29 AC093270.2-201ENST00000486157 792 ntBASIC5.72□□□□□ -1.49
SMIM28A0A1B0GU29 AC004453.1-201ENST00000487895 408 ntBASIC5.72□□□□□ -1.49
SMIM28A0A1B0GU29 AC090058.1-201ENST00000498788 435 ntBASIC5.72□□□□□ -1.49
SMIM28A0A1B0GU29 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms