Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 LINC01963-201ENST00000562038 3148 ntBASIC4.18□□□□□ -1.74
HLA-DRB4X5D2U9 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-DRB4X5D2U9 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
HLA-DRB4X5D2U9 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-DRB4X5D2U9 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.18□□□□□ -1.74
HLA-DRB4X5D2U9 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-DRB4X5D2U9 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
HLA-DRB4X5D2U9 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
HLA-DRB4X5D2U9 AC007342.5-201ENST00000571340 2142 ntBASIC4.18□□□□□ -1.74
HLA-DRB4X5D2U9 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 AL360270.2-201ENST00000562952 5985 ntBASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 RN7SKP286-201ENST00000410894 299 ntBASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 RMRPP5-201ENST00000411156 267 ntBASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 OR2AT2P-201ENST00000413438 905 ntBASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 AL133482.1-201ENST00000415988 498 ntBASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 RPL34P3-201ENST00000421454 338 ntBASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 LINC02210-201ENST00000444561 288 ntBASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 OR52E7P-201ENST00000452394 933 ntBASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 AC084754.1-201ENST00000463466 464 ntBASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 PSAT1P4-201ENST00000466500 526 ntBASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 CYCSP22-201ENST00000517555 339 ntBASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 AC122688.1-201ENST00000541494 223 ntBASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 AL390726.5-202ENST00000564800 256 ntBASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 AC100767.2-201ENST00000604840 693 ntBASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 AC099654.6-201ENST00000636487 512 ntBASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 MIR193BHG-214ENST00000641765 509 ntBASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 AL138820.1-201ENST00000617901 5305 ntBASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 ZNF652P1-201ENST00000442420 1309 ntBASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 AL731566.1-201ENST00000620490 1937 ntBASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.17□□□□□ -1.74
HLA-DRB4X5D2U9 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
HLA-DRB4X5D2U9 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DRB4X5D2U9 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DRB4X5D2U9 THAP12P5-201ENST00000405864 2275 ntBASIC4.16□□□□□ -1.74
HLA-DRB4X5D2U9 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DRB4X5D2U9 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DRB4X5D2U9 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.16□□□□□ -1.74
HLA-DRB4X5D2U9 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DRB4X5D2U9 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
HLA-DRB4X5D2U9 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DRB4X5D2U9 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DRB4X5D2U9 AL078621.3-201ENST00000623707 2042 ntBASIC4.16□□□□□ -1.74
HLA-DRB4X5D2U9 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
HLA-DRB4X5D2U9 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DRB4X5D2U9 MT-RNR2-201ENST00000387347 1559 ntBASIC4.16□□□□□ -1.74
HLA-DRB4X5D2U9 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DRB4X5D2U9 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DRB4X5D2U9 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
HLA-DRB4X5D2U9 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DRB4X5D2U9 RNA5SP326-201ENST00000363209 110 ntBASIC4.16□□□□□ -1.74
HLA-DRB4X5D2U9 RNA5SP394-201ENST00000364216 119 ntBASIC4.16□□□□□ -1.74
HLA-DRB4X5D2U9 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.16□□□□□ -1.74
HLA-DRB4X5D2U9 RNA5SP284-201ENST00000384547 118 ntBASIC4.16□□□□□ -1.74
HLA-DRB4X5D2U9 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
HLA-DRB4X5D2U9 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.16□□□□□ -1.74
HLA-DRB4X5D2U9 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms