Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AL512427.1-201ENST00000618593 349 ntBASIC6.85□□□□□ -1.31
COL4A3BPQ9Y5P4 SNORA11.6-201ENST00000619030 128 ntBASIC6.85□□□□□ -1.31
COL4A3BPQ9Y5P4 AL162377.2-201ENST00000624532 337 ntBASIC6.85□□□□□ -1.31
COL4A3BPQ9Y5P4 AC010608.3-201ENST00000625048 527 ntBASIC6.85□□□□□ -1.31
COL4A3BPQ9Y5P4 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.85□□□□□ -1.31
COL4A3BPQ9Y5P4 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL4A3BPQ9Y5P4 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
COL4A3BPQ9Y5P4 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL4A3BPQ9Y5P4 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL4A3BPQ9Y5P4 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COL4A3BPQ9Y5P4 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL4A3BPQ9Y5P4 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL4A3BPQ9Y5P4 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COL4A3BPQ9Y5P4 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.85□□□□□ -1.31
COL4A3BPQ9Y5P4 AL662795.2-201ENST00000624252 3706 ntBASIC6.85□□□□□ -1.31
COL4A3BPQ9Y5P4 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
COL4A3BPQ9Y5P4 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 AC011416.1-201ENST00000514947 1732 ntBASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 CCT8P1-201ENST00000413611 1657 ntBASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 RNU6-225P-201ENST00000384613 103 ntBASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 MIR130B-202ENST00000385018 82 ntBASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 RN7SKP151-201ENST00000410230 316 ntBASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 Z68694.1-201ENST00000413929 841 ntBASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 MTND4LP17-201ENST00000414607 293 ntBASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 AC073310.1-201ENST00000423226 1033 ntBASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 KCTD9P1-201ENST00000430462 1167 ntBASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 AL353662.1-201ENST00000439099 327 ntBASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 AL035551.1-201ENST00000446931 348 ntBASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 AL096803.2-201ENST00000450032 677 ntBASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 PPIAP27-201ENST00000453800 265 ntBASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 LSM3P4-201ENST00000502948 309 ntBASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 AC010374.1-201ENST00000503762 1237 ntBASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 AL158068.1-201ENST00000506116 616 ntBASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 PRMT5P1-201ENST00000514351 598 ntBASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 RN7SKP248-201ENST00000516278 305 ntBASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 AC008555.7-201ENST00000605008 583 ntBASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 AP002802.2-201ENST00000605877 235 ntBASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 OR2BH1P-201ENST00000608850 864 ntBASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 AC091046.2-201ENST00000620775 665 ntBASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 OR4G3P-201ENST00000633500 913 ntBASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL4A3BPQ9Y5P4 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.84□□□□□ -1.32
COL4A3BPQ9Y5P4 AL355377.1-201ENST00000621125 1653 ntBASIC6.84□□□□□ -1.32
COL4A3BPQ9Y5P4 AC016745.2-201ENST00000608834 3443 ntBASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 AL645568.2-201ENST00000432815 1337 ntBASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 RNU1-134P-201ENST00000362935 165 ntBASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 RNU5B-4P-201ENST00000363508 111 ntBASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 RNA5SP156-201ENST00000410250 110 ntBASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 AC096533.1-201ENST00000411645 353 ntBASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 MTND4P11-201ENST00000417020 1058 ntBASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 AC112187.1-201ENST00000455837 479 ntBASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 AC023194.2-201ENST00000465398 406 ntBASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 NDUFA5P5-201ENST00000468361 342 ntBASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 AC098847.1-201ENST00000473094 348 ntBASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms