Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 MSL3P1-202ENST00000440028 1468 ntBASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 AC097063.1-201ENST00000426714 1797 ntBASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 SNORA51.1-201ENST00000363243 140 ntBASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 AC005522.1-201ENST00000395416 346 ntBASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 AC016739.1-201ENST00000405359 345 ntBASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 AL354890.1-201ENST00000413730 346 ntBASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 MTND2P16-201ENST00000419987 799 ntBASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 AL034379.1-201ENST00000423216 253 ntBASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 MTCO2P23-201ENST00000425216 680 ntBASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 HMGN1P36-201ENST00000446623 298 ntBASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 UBFD1P1-201ENST00000473259 814 ntBASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 AC099521.1-201ENST00000482557 334 ntBASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 AC109481.1-201ENST00000509173 282 ntBASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 AP000648.1-201ENST00000529682 397 ntBASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 ZKSCAN7P1-201ENST00000543668 673 ntBASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 AP001496.3-201ENST00000580230 913 ntBASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 ELOCP35-201ENST00000604289 336 ntBASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 KATNBL1P5-201ENST00000605015 517 ntBASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 AL031601.1-201ENST00000605702 394 ntBASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 AC096586.2-201ENST00000610260 441 ntBASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 AC073869.7-201ENST00000640874 297 ntBASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 PDZK1P1-202ENST00000425209 1350 ntBASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 MTCO1P11-201ENST00000429111 1528 ntBASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 AC110792.3-201ENST00000595906 1614 ntBASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 SELENOWP1-201ENST00000322792 252 ntBASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 Y_RNA.62-201ENST00000362840 99 ntBASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 RNU6-618P-201ENST00000363518 112 ntBASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 AC087752.1-201ENST00000391360 558 ntBASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 AL096711.1-201ENST00000404780 554 ntBASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 RN7SKP286-201ENST00000410894 299 ntBASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 RNU2-22P-201ENST00000411266 212 ntBASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 RPL35AP3-201ENST00000414680 288 ntBASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 CHEK2P5-201ENST00000423877 246 ntBASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 RRM2P4-201ENST00000441721 562 ntBASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 REG1CP-206ENST00000447469 496 ntBASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 NAMPTP2-201ENST00000505629 1115 ntBASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 SCARNA21.2-201ENST00000516600 166 ntBASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 SNORA70.20-201ENST00000516848 126 ntBASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 TPM3P3-201ENST00000521343 354 ntBASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 MORF4L1P3-201ENST00000525966 950 ntBASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 OR6M2P-201ENST00000529831 871 ntBASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 OR8K4P-201ENST00000534608 872 ntBASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 AC098935.2-201ENST00000604222 466 ntBASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 LSM1P2-201ENST00000604911 322 ntBASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms