Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.79□□□□□ -1.48
YIPF1Q9Y548 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.79□□□□□ -1.48
YIPF1Q9Y548 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
YIPF1Q9Y548 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
YIPF1Q9Y548 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.78□□□□□ -1.48
YIPF1Q9Y548 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.78□□□□□ -1.48
YIPF1Q9Y548 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
YIPF1Q9Y548 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
YIPF1Q9Y548 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
YIPF1Q9Y548 AL589826.1-201ENST00000340697 249 ntBASIC5.78□□□□□ -1.48
YIPF1Q9Y548 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
YIPF1Q9Y548 AL121886.1-201ENST00000358609 435 ntBASIC5.78□□□□□ -1.48
YIPF1Q9Y548 RNA5SP507-201ENST00000363603 121 ntBASIC5.78□□□□□ -1.48
YIPF1Q9Y548 AL133388.1-201ENST00000404509 287 ntBASIC5.78□□□□□ -1.48
YIPF1Q9Y548 RPSAP35-201ENST00000413753 818 ntBASIC5.78□□□□□ -1.48
YIPF1Q9Y548 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.78□□□□□ -1.48
YIPF1Q9Y548 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC5.78□□□□□ -1.48
YIPF1Q9Y548 AC013268.2-201ENST00000420753 337 ntBASIC5.78□□□□□ -1.48
YIPF1Q9Y548 SRSF1P1-201ENST00000424058 520 ntBASIC5.78□□□□□ -1.48
YIPF1Q9Y548 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.78□□□□□ -1.48
YIPF1Q9Y548 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
YIPF1Q9Y548 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.78□□□□□ -1.48
YIPF1Q9Y548 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC5.78□□□□□ -1.48
YIPF1Q9Y548 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.78□□□□□ -1.48
YIPF1Q9Y548 SEPT7P6-201ENST00000469999 1143 ntBASIC5.78□□□□□ -1.48
YIPF1Q9Y548 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.78□□□□□ -1.48
YIPF1Q9Y548 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.78□□□□□ -1.48
YIPF1Q9Y548 MTND6P2-201ENST00000512226 524 ntBASIC5.78□□□□□ -1.48
YIPF1Q9Y548 RN7SKP253-201ENST00000516424 309 ntBASIC5.78□□□□□ -1.48
YIPF1Q9Y548 RN7SKP5-201ENST00000517045 272 ntBASIC5.78□□□□□ -1.48
YIPF1Q9Y548 HMGB1P40-201ENST00000525121 540 ntBASIC5.78□□□□□ -1.48
YIPF1Q9Y548 GTF2IP11-201ENST00000526931 420 ntBASIC5.78□□□□□ -1.48
YIPF1Q9Y548 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC5.78□□□□□ -1.48
YIPF1Q9Y548 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC5.78□□□□□ -1.48
YIPF1Q9Y548 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.78□□□□□ -1.48
YIPF1Q9Y548 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.78□□□□□ -1.48
YIPF1Q9Y548 AC106730.2-201ENST00000566641 540 ntBASIC5.78□□□□□ -1.48
YIPF1Q9Y548 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
YIPF1Q9Y548 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.78□□□□□ -1.48
YIPF1Q9Y548 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.78□□□□□ -1.48
YIPF1Q9Y548 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
YIPF1Q9Y548 AC126915.2-201ENST00000610957 190 ntBASIC5.78□□□□□ -1.48
YIPF1Q9Y548 RPSAP73-201ENST00000614820 330 ntBASIC5.78□□□□□ -1.48
YIPF1Q9Y548 MIR7155-201ENST00000615925 56 ntBASIC5.78□□□□□ -1.48
YIPF1Q9Y548 WBP1LP8-201ENST00000617401 327 ntBASIC5.78□□□□□ -1.48
YIPF1Q9Y548 AP002505.2-201ENST00000623585 696 ntBASIC5.78□□□□□ -1.48
YIPF1Q9Y548 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.78□□□□□ -1.48
YIPF1Q9Y548 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
YIPF1Q9Y548 DNM1P47-203ENST00000571780 12667 ntBASIC5.78□□□□□ -1.48
YIPF1Q9Y548 AC144833.1-201ENST00000567953 4089 ntBASIC5.78□□□□□ -1.48
YIPF1Q9Y548 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
YIPF1Q9Y548 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
YIPF1Q9Y548 AC007938.2-201ENST00000604666 2634 ntBASIC5.78□□□□□ -1.48
YIPF1Q9Y548 AC068870.1-201ENST00000563737 2455 ntBASIC5.77□□□□□ -1.48
YIPF1Q9Y548 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.77□□□□□ -1.48
YIPF1Q9Y548 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.48
YIPF1Q9Y548 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
YIPF1Q9Y548 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
YIPF1Q9Y548 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC5.77□□□□□ -1.49
YIPF1Q9Y548 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
YIPF1Q9Y548 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
YIPF1Q9Y548 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
YIPF1Q9Y548 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
YIPF1Q9Y548 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
YIPF1Q9Y548 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
YIPF1Q9Y548 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
YIPF1Q9Y548 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.77□□□□□ -1.49
YIPF1Q9Y548 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
YIPF1Q9Y548 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.77□□□□□ -1.49
YIPF1Q9Y548 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.77□□□□□ -1.49
YIPF1Q9Y548 FAM96AP1-201ENST00000430879 482 ntBASIC5.77□□□□□ -1.49
YIPF1Q9Y548 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.77□□□□□ -1.49
YIPF1Q9Y548 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.77□□□□□ -1.49
YIPF1Q9Y548 AL035090.1-201ENST00000454835 332 ntBASIC5.77□□□□□ -1.49
YIPF1Q9Y548 RPL15P21-201ENST00000495592 567 ntBASIC5.77□□□□□ -1.49
YIPF1Q9Y548 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.77□□□□□ -1.49
YIPF1Q9Y548 AC112184.1-201ENST00000505179 312 ntBASIC5.77□□□□□ -1.49
YIPF1Q9Y548 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.77□□□□□ -1.49
YIPF1Q9Y548 SCARNA16.4-201ENST00000516956 187 ntBASIC5.77□□□□□ -1.49
YIPF1Q9Y548 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
YIPF1Q9Y548 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.77□□□□□ -1.49
YIPF1Q9Y548 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.77□□□□□ -1.49
YIPF1Q9Y548 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.77□□□□□ -1.49
YIPF1Q9Y548 AL049874.4-201ENST00000557593 255 ntBASIC5.77□□□□□ -1.49
YIPF1Q9Y548 AC037198.3-201ENST00000616754 526 ntBASIC5.77□□□□□ -1.49
YIPF1Q9Y548 AC079776.5-201ENST00000641920 211 ntBASIC5.77□□□□□ -1.49
YIPF1Q9Y548 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
YIPF1Q9Y548 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
YIPF1Q9Y548 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.77□□□□□ -1.49
YIPF1Q9Y548 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.77□□□□□ -1.49
YIPF1Q9Y548 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
YIPF1Q9Y548 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
YIPF1Q9Y548 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
YIPF1Q9Y548 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
YIPF1Q9Y548 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
YIPF1Q9Y548 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
YIPF1Q9Y548 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
YIPF1Q9Y548 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.77□□□□□ -1.49
YIPF1Q9Y548 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
YIPF1Q9Y548 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms