Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AC021220.1-201ENST00000507445 630 ntBASIC7.38□□□□□ -1.23
CNTN3Q9P232 AC109445.1-201ENST00000512356 383 ntBASIC7.38□□□□□ -1.23
CNTN3Q9P232 AC008837.2-201ENST00000513076 418 ntBASIC7.38□□□□□ -1.23
CNTN3Q9P232 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC7.38□□□□□ -1.23
CNTN3Q9P232 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC7.38□□□□□ -1.23
CNTN3Q9P232 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC7.38□□□□□ -1.23
CNTN3Q9P232 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC7.38□□□□□ -1.23
CNTN3Q9P232 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC7.38□□□□□ -1.23
CNTN3Q9P232 OR5BK1P-201ENST00000550421 823 ntBASIC7.38□□□□□ -1.23
CNTN3Q9P232 RPS3AP4-201ENST00000555161 764 ntBASIC7.38□□□□□ -1.23
CNTN3Q9P232 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
CNTN3Q9P232 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
CNTN3Q9P232 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC7.38□□□□□ -1.23
CNTN3Q9P232 RPL7AP69-201ENST00000595306 806 ntBASIC7.38□□□□□ -1.23
CNTN3Q9P232 RPS11-205ENST00000599561 430 ntTSL 5 BASIC7.38□□□□□ -1.23
CNTN3Q9P232 AC036176.3-201ENST00000602456 418 ntBASIC7.38□□□□□ -1.23
CNTN3Q9P232 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC7.38□□□□□ -1.23
CNTN3Q9P232 NDUFB9P1-201ENST00000604683 510 ntBASIC7.38□□□□□ -1.23
CNTN3Q9P232 AL391497.1-201ENST00000608671 547 ntBASIC7.38□□□□□ -1.23
CNTN3Q9P232 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CNTN3Q9P232 AC006328.2-201ENST00000623198 397 ntBASIC7.38□□□□□ -1.23
CNTN3Q9P232 AC012005.2-201ENST00000624333 397 ntBASIC7.38□□□□□ -1.23
CNTN3Q9P232 AC024023.1-201ENST00000624530 922 ntBASIC7.38□□□□□ -1.23
CNTN3Q9P232 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC7.38□□□□□ -1.23
CNTN3Q9P232 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC7.38□□□□□ -1.23
CNTN3Q9P232 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC7.38□□□□□ -1.23
CNTN3Q9P232 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CNTN3Q9P232 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC7.38□□□□□ -1.23
CNTN3Q9P232 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.38□□□□□ -1.23
CNTN3Q9P232 OR2AH1P-202ENST00000641232 2744 ntBASIC7.38□□□□□ -1.23
CNTN3Q9P232 AC061975.7-201ENST00000592016 2692 ntBASIC7.38□□□□□ -1.23
CNTN3Q9P232 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC7.38□□□□□ -1.23
CNTN3Q9P232 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CNTN3Q9P232 ZNF806-201ENST00000438300 1774 ntBASIC7.38□□□□□ -1.23
CNTN3Q9P232 AP005901.5-201ENST00000545779 1796 ntBASIC7.38□□□□□ -1.23
CNTN3Q9P232 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CNTN3Q9P232 AC104581.5-201ENST00000624171 7141 ntBASIC7.38□□□□□ -1.23
CNTN3Q9P232 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC7.38□□□□□ -1.23
CNTN3Q9P232 CR848007.1-201ENST00000442354 1699 ntBASIC7.38□□□□□ -1.23
CNTN3Q9P232 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CNTN3Q9P232 CA10-204ENST00000570565 2276 ntTSL 5 BASIC7.38□□□□□ -1.23
CNTN3Q9P232 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CNTN3Q9P232 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CNTN3Q9P232 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
CNTN3Q9P232 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC7.37□□□□□ -1.23
CNTN3Q9P232 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
CNTN3Q9P232 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CNTN3Q9P232 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
CNTN3Q9P232 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CNTN3Q9P232 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC7.37□□□□□ -1.23
CNTN3Q9P232 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CNTN3Q9P232 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CNTN3Q9P232 VN2R3P-201ENST00000422626 1412 ntBASIC7.37□□□□□ -1.23
CNTN3Q9P232 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
CNTN3Q9P232 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
CNTN3Q9P232 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC7.37□□□□□ -1.23
CNTN3Q9P232 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CNTN3Q9P232 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC7.37□□□□□ -1.23
CNTN3Q9P232 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CNTN3Q9P232 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
CNTN3Q9P232 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CNTN3Q9P232 MGP-201ENST00000228938 694 ntTSL 3 BASIC7.37□□□□□ -1.23
CNTN3Q9P232 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CNTN3Q9P232 RPL12P13-201ENST00000310055 497 ntBASIC7.37□□□□□ -1.23
CNTN3Q9P232 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
CNTN3Q9P232 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
CNTN3Q9P232 RNU6-253P-201ENST00000384730 105 ntBASIC7.37□□□□□ -1.23
CNTN3Q9P232 SNORD94-201ENST00000386037 137 ntBASIC7.37□□□□□ -1.23
CNTN3Q9P232 RNA5SP474-201ENST00000391234 90 ntBASIC7.37□□□□□ -1.23
CNTN3Q9P232 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CNTN3Q9P232 UBBP1-201ENST00000392399 473 ntBASIC7.37□□□□□ -1.23
CNTN3Q9P232 FDPSP5-201ENST00000399474 1057 ntBASIC7.37□□□□□ -1.23
CNTN3Q9P232 AL590635.1-201ENST00000406314 586 ntBASIC7.37□□□□□ -1.23
CNTN3Q9P232 RN7SKP271-201ENST00000410528 320 ntBASIC7.37□□□□□ -1.23
CNTN3Q9P232 AC010385.1-201ENST00000412374 256 ntBASIC7.37□□□□□ -1.23
CNTN3Q9P232 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC7.37□□□□□ -1.23
CNTN3Q9P232 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC7.37□□□□□ -1.23
CNTN3Q9P232 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC7.37□□□□□ -1.23
CNTN3Q9P232 FO393419.3-201ENST00000428741 282 ntBASIC7.37□□□□□ -1.23
CNTN3Q9P232 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC7.37□□□□□ -1.23
CNTN3Q9P232 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC7.37□□□□□ -1.23
CNTN3Q9P232 AL356121.1-201ENST00000442911 156 ntBASIC7.37□□□□□ -1.23
CNTN3Q9P232 GAPDHP20-201ENST00000444107 1007 ntBASIC7.37□□□□□ -1.23
CNTN3Q9P232 UBE2V1P7-201ENST00000446395 340 ntBASIC7.37□□□□□ -1.23
CNTN3Q9P232 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC7.37□□□□□ -1.23
CNTN3Q9P232 VNN3-210ENST00000450865 596 ntTSL 4 BASIC7.37□□□□□ -1.23
CNTN3Q9P232 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC7.37□□□□□ -1.23
CNTN3Q9P232 KATNBL1P6-201ENST00000453433 915 ntBASIC7.37□□□□□ -1.23
CNTN3Q9P232 RN7SL259P-201ENST00000478499 253 ntBASIC7.37□□□□□ -1.23
CNTN3Q9P232 RPL23AP37-201ENST00000479658 549 ntBASIC7.37□□□□□ -1.23
CNTN3Q9P232 RN7SL502P-201ENST00000481857 290 ntBASIC7.37□□□□□ -1.23
CNTN3Q9P232 SNRPCP11-201ENST00000492453 205 ntBASIC7.37□□□□□ -1.23
CNTN3Q9P232 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC7.37□□□□□ -1.23
CNTN3Q9P232 AC096751.1-202ENST00000502691 1067 ntBASIC7.37□□□□□ -1.23
CNTN3Q9P232 MYL12BP2-201ENST00000503948 512 ntBASIC7.37□□□□□ -1.23
CNTN3Q9P232 AC147055.4-201ENST00000504399 745 ntBASIC7.37□□□□□ -1.23
CNTN3Q9P232 PRDX4P1-201ENST00000507189 574 ntBASIC7.37□□□□□ -1.23
CNTN3Q9P232 AP001804.2-201ENST00000533932 910 ntBASIC7.37□□□□□ -1.23
CNTN3Q9P232 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
CNTN3Q9P232 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC7.37□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms