Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC6.76□□□□□ -1.33
VTA1Q9NP79 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
VTA1Q9NP79 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
VTA1Q9NP79 AC073365.1-203ENST00000641055 1992 ntBASIC6.75□□□□□ -1.33
VTA1Q9NP79 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
VTA1Q9NP79 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
VTA1Q9NP79 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.75□□□□□ -1.33
VTA1Q9NP79 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
VTA1Q9NP79 AC130360.2-201ENST00000533477 1556 ntBASIC6.75□□□□□ -1.33
VTA1Q9NP79 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
VTA1Q9NP79 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
VTA1Q9NP79 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
VTA1Q9NP79 AC119674.1-213ENST00000641177 1386 ntBASIC6.75□□□□□ -1.33
VTA1Q9NP79 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
VTA1Q9NP79 AP002784.2-201ENST00000397300 549 ntBASIC6.75□□□□□ -1.33
VTA1Q9NP79 RNU2-17P-201ENST00000410290 190 ntBASIC6.75□□□□□ -1.33
VTA1Q9NP79 RPL26P37-201ENST00000411983 438 ntBASIC6.75□□□□□ -1.33
VTA1Q9NP79 AK4P4-201ENST00000419465 646 ntBASIC6.75□□□□□ -1.33
VTA1Q9NP79 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.75□□□□□ -1.33
VTA1Q9NP79 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.75□□□□□ -1.33
VTA1Q9NP79 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC6.75□□□□□ -1.33
VTA1Q9NP79 AL451136.1-201ENST00000435399 325 ntBASIC6.75□□□□□ -1.33
VTA1Q9NP79 AL445928.1-201ENST00000435545 222 ntBASIC6.75□□□□□ -1.33
VTA1Q9NP79 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.75□□□□□ -1.33
VTA1Q9NP79 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
VTA1Q9NP79 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC6.75□□□□□ -1.33
VTA1Q9NP79 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.75□□□□□ -1.33
VTA1Q9NP79 AC104164.1-201ENST00000460282 590 ntBASIC6.75□□□□□ -1.33
VTA1Q9NP79 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
VTA1Q9NP79 RPL21P47-201ENST00000483696 477 ntBASIC6.75□□□□□ -1.33
VTA1Q9NP79 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
VTA1Q9NP79 NENFP3-201ENST00000503735 313 ntBASIC6.75□□□□□ -1.33
VTA1Q9NP79 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC6.75□□□□□ -1.33
VTA1Q9NP79 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
VTA1Q9NP79 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.75□□□□□ -1.33
VTA1Q9NP79 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC6.75□□□□□ -1.33
VTA1Q9NP79 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
VTA1Q9NP79 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC6.75□□□□□ -1.33
VTA1Q9NP79 AC021451.1-201ENST00000523498 1129 ntBASIC6.75□□□□□ -1.33
VTA1Q9NP79 HMGN2P36-201ENST00000529541 409 ntBASIC6.75□□□□□ -1.33
VTA1Q9NP79 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.75□□□□□ -1.33
VTA1Q9NP79 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.75□□□□□ -1.33
VTA1Q9NP79 AC104229.1-201ENST00000561364 255 ntBASIC6.75□□□□□ -1.33
VTA1Q9NP79 AC007225.2-201ENST00000562529 256 ntBASIC6.75□□□□□ -1.33
VTA1Q9NP79 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.75□□□□□ -1.33
VTA1Q9NP79 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.75□□□□□ -1.33
VTA1Q9NP79 AC011492.1-201ENST00000600023 315 ntBASIC6.75□□□□□ -1.33
VTA1Q9NP79 AL357094.1-201ENST00000603845 844 ntBASIC6.75□□□□□ -1.33
VTA1Q9NP79 AC069431.2-201ENST00000604149 1099 ntBASIC6.75□□□□□ -1.33
VTA1Q9NP79 OR7A19P-201ENST00000608051 733 ntBASIC6.75□□□□□ -1.33
VTA1Q9NP79 MIR6826-201ENST00000617808 98 ntBASIC6.75□□□□□ -1.33
VTA1Q9NP79 AC021422.1-201ENST00000621212 473 ntBASIC6.75□□□□□ -1.33
VTA1Q9NP79 AC006927.2-201ENST00000639256 389 ntBASIC6.75□□□□□ -1.33
VTA1Q9NP79 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.75□□□□□ -1.33
VTA1Q9NP79 AC007114.2-201ENST00000576014 4281 ntBASIC6.75□□□□□ -1.33
VTA1Q9NP79 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.75□□□□□ -1.33
VTA1Q9NP79 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
VTA1Q9NP79 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.75□□□□□ -1.33
VTA1Q9NP79 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.75□□□□□ -1.33
VTA1Q9NP79 SHQ1P1-201ENST00000437111 1544 ntBASIC6.75□□□□□ -1.33
VTA1Q9NP79 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
VTA1Q9NP79 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
VTA1Q9NP79 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
VTA1Q9NP79 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
VTA1Q9NP79 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.75□□□□□ -1.33
VTA1Q9NP79 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.74□□□□□ -1.33
VTA1Q9NP79 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
VTA1Q9NP79 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
VTA1Q9NP79 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
VTA1Q9NP79 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
VTA1Q9NP79 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
VTA1Q9NP79 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.74□□□□□ -1.33
VTA1Q9NP79 AL391261.1-201ENST00000555712 1479 ntBASIC6.74□□□□□ -1.33
VTA1Q9NP79 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
VTA1Q9NP79 MAPK10-261ENST00000641050 3109 ntBASIC6.74□□□□□ -1.33
VTA1Q9NP79 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
VTA1Q9NP79 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
VTA1Q9NP79 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC6.74□□□□□ -1.33
VTA1Q9NP79 RPL7P58-201ENST00000402913 758 ntBASIC6.74□□□□□ -1.33
VTA1Q9NP79 NPM1P37-201ENST00000403105 874 ntBASIC6.74□□□□□ -1.33
VTA1Q9NP79 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
VTA1Q9NP79 RMRPP5-201ENST00000411156 267 ntBASIC6.74□□□□□ -1.33
VTA1Q9NP79 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
VTA1Q9NP79 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.74□□□□□ -1.33
VTA1Q9NP79 MTCO1P43-201ENST00000431831 488 ntBASIC6.74□□□□□ -1.33
VTA1Q9NP79 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.74□□□□□ -1.33
VTA1Q9NP79 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC6.74□□□□□ -1.33
VTA1Q9NP79 RPS7P3-201ENST00000443360 580 ntBASIC6.74□□□□□ -1.33
VTA1Q9NP79 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC6.74□□□□□ -1.33
VTA1Q9NP79 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.74□□□□□ -1.33
VTA1Q9NP79 RPS3AP53-201ENST00000454716 778 ntBASIC6.74□□□□□ -1.33
VTA1Q9NP79 AC103563.5-201ENST00000455643 364 ntBASIC6.74□□□□□ -1.33
VTA1Q9NP79 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC6.74□□□□□ -1.33
VTA1Q9NP79 RPS4XP14-201ENST00000493072 781 ntBASIC6.74□□□□□ -1.33
VTA1Q9NP79 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC6.74□□□□□ -1.33
VTA1Q9NP79 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.74□□□□□ -1.33
VTA1Q9NP79 OR5H3P-201ENST00000502817 919 ntBASIC6.74□□□□□ -1.33
VTA1Q9NP79 AC069306.1-201ENST00000507006 843 ntBASIC6.74□□□□□ -1.33
VTA1Q9NP79 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC6.74□□□□□ -1.33
VTA1Q9NP79 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms