Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 NACA-203ENST00000454682 6629 ntTSL 5 BASIC5.09□□□□□ -1.6
CHD8Q9HCK8 IL22RA2-201ENST00000296980 2886 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CHD8Q9HCK8 DNM1P47-203ENST00000571780 12667 ntBASIC5.09□□□□□ -1.6
CHD8Q9HCK8 HSPA8P15-201ENST00000401676 786 ntBASIC5.09□□□□□ -1.6
CHD8Q9HCK8 RNA5SP113-201ENST00000410486 84 ntBASIC5.09□□□□□ -1.6
CHD8Q9HCK8 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC5.09□□□□□ -1.6
CHD8Q9HCK8 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.09□□□□□ -1.6
CHD8Q9HCK8 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.09□□□□□ -1.6
CHD8Q9HCK8 GTF2F2P1-201ENST00000511083 675 ntBASIC5.09□□□□□ -1.6
CHD8Q9HCK8 OR8A2P-201ENST00000528631 952 ntBASIC5.09□□□□□ -1.6
CHD8Q9HCK8 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.09□□□□□ -1.6
CHD8Q9HCK8 AC244100.1-202ENST00000621554 382 ntBASIC5.09□□□□□ -1.6
CHD8Q9HCK8 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC5.08□□□□□ -1.6
CHD8Q9HCK8 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
CHD8Q9HCK8 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC5.08□□□□□ -1.6
CHD8Q9HCK8 FGD6-201ENST00000343958 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CHD8Q9HCK8 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CHD8Q9HCK8 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CHD8Q9HCK8 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CHD8Q9HCK8 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CHD8Q9HCK8 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CHD8Q9HCK8 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CHD8Q9HCK8 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CHD8Q9HCK8 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CHD8Q9HCK8 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CHD8Q9HCK8 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CHD8Q9HCK8 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CHD8Q9HCK8 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CHD8Q9HCK8 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.08□□□□□ -1.6
CHD8Q9HCK8 AL672167.2-201ENST00000377164 879 ntBASIC5.08□□□□□ -1.6
CHD8Q9HCK8 MIR483-201ENST00000385070 76 ntBASIC5.08□□□□□ -1.6
CHD8Q9HCK8 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.08□□□□□ -1.6
CHD8Q9HCK8 AL713922.1-201ENST00000416477 747 ntBASIC5.08□□□□□ -1.6
CHD8Q9HCK8 RPS27AP12-201ENST00000429552 465 ntBASIC5.08□□□□□ -1.6
CHD8Q9HCK8 TMEM183AP1-205ENST00000432739 290 ntBASIC5.08□□□□□ -1.6
CHD8Q9HCK8 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.08□□□□□ -1.6
CHD8Q9HCK8 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.08□□□□□ -1.6
CHD8Q9HCK8 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.08□□□□□ -1.6
CHD8Q9HCK8 RNA5SP464-201ENST00000516251 108 ntBASIC5.08□□□□□ -1.6
CHD8Q9HCK8 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.08□□□□□ -1.6
CHD8Q9HCK8 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.08□□□□□ -1.6
CHD8Q9HCK8 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.08□□□□□ -1.6
CHD8Q9HCK8 MIR3667-201ENST00000581025 74 ntBASIC5.08□□□□□ -1.6
CHD8Q9HCK8 AC139493.1-201ENST00000604368 397 ntBASIC5.08□□□□□ -1.6
CHD8Q9HCK8 AC023043.4-201ENST00000612081 449 ntBASIC5.08□□□□□ -1.6
CHD8Q9HCK8 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC5.08□□□□□ -1.6
CHD8Q9HCK8 KARSP3-201ENST00000571212 1504 ntBASIC5.08□□□□□ -1.6
CHD8Q9HCK8 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CHD8Q9HCK8 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.08□□□□□ -1.6
CHD8Q9HCK8 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC5.08□□□□□ -1.6
CHD8Q9HCK8 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.08□□□□□ -1.6
CHD8Q9HCK8 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CHD8Q9HCK8 AC107980.1-201ENST00000558671 3355 ntBASIC5.08□□□□□ -1.6
CHD8Q9HCK8 THAP12P4-201ENST00000528321 2266 ntBASIC5.08□□□□□ -1.6
CHD8Q9HCK8 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.08□□□□□ -1.6
CHD8Q9HCK8 AC009166.2-201ENST00000624410 2833 ntBASIC5.08□□□□□ -1.6
CHD8Q9HCK8 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.08□□□□□ -1.6
CHD8Q9HCK8 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CHD8Q9HCK8 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CHD8Q9HCK8 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CHD8Q9HCK8 RNA5SP447-201ENST00000363749 119 ntBASIC5.08□□□□□ -1.6
CHD8Q9HCK8 NPM1P51-201ENST00000443470 744 ntBASIC5.08□□□□□ -1.6
CHD8Q9HCK8 RPS4XP20-201ENST00000505751 772 ntBASIC5.08□□□□□ -1.6
CHD8Q9HCK8 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.08□□□□□ -1.6
CHD8Q9HCK8 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.08□□□□□ -1.6
CHD8Q9HCK8 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CHD8Q9HCK8 MIR5095-201ENST00000578844 88 ntBASIC5.08□□□□□ -1.6
CHD8Q9HCK8 MIR4715-201ENST00000584117 79 ntBASIC5.08□□□□□ -1.6
CHD8Q9HCK8 AL445567.2-201ENST00000618935 498 ntBASIC5.08□□□□□ -1.6
CHD8Q9HCK8 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC5.08□□□□□ -1.6
CHD8Q9HCK8 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CHD8Q9HCK8 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.07□□□□□ -1.6
CHD8Q9HCK8 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CHD8Q9HCK8 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHD8Q9HCK8 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC5.07□□□□□ -1.6
CHD8Q9HCK8 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CHD8Q9HCK8 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CHD8Q9HCK8 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHD8Q9HCK8 NXF4-202ENST00000416098 1465 ntBASIC5.07□□□□□ -1.6
CHD8Q9HCK8 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHD8Q9HCK8 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
CHD8Q9HCK8 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CHD8Q9HCK8 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CHD8Q9HCK8 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHD8Q9HCK8 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHD8Q9HCK8 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHD8Q9HCK8 AC004074.1-201ENST00000421810 1063 ntBASIC5.07□□□□□ -1.6
CHD8Q9HCK8 RCC2P2-201ENST00000422174 918 ntBASIC5.07□□□□□ -1.6
CHD8Q9HCK8 RPL12P34-201ENST00000424532 479 ntBASIC5.07□□□□□ -1.6
CHD8Q9HCK8 AL672138.1-201ENST00000450604 1015 ntBASIC5.07□□□□□ -1.6
CHD8Q9HCK8 RN7SL542P-201ENST00000467147 294 ntBASIC5.07□□□□□ -1.6
CHD8Q9HCK8 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.07□□□□□ -1.6
CHD8Q9HCK8 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.07□□□□□ -1.6
CHD8Q9HCK8 MRPS33P2-201ENST00000507850 322 ntBASIC5.07□□□□□ -1.6
CHD8Q9HCK8 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.07□□□□□ -1.6
CHD8Q9HCK8 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.07□□□□□ -1.6
CHD8Q9HCK8 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.07□□□□□ -1.6
CHD8Q9HCK8 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHD8Q9HCK8 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHD8Q9HCK8 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms