Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
BRF2Q9HAW0 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
BRF2Q9HAW0 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.6□□□□□ -1.51
BRF2Q9HAW0 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.6□□□□□ -1.51
BRF2Q9HAW0 AP002512.4-202ENST00000641599 4530 ntBASIC5.6□□□□□ -1.51
BRF2Q9HAW0 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
BRF2Q9HAW0 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
BRF2Q9HAW0 MFSD8-239ENST00000641590 2479 ntBASIC5.59□□□□□ -1.51
BRF2Q9HAW0 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.59□□□□□ -1.51
BRF2Q9HAW0 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.59□□□□□ -1.51
BRF2Q9HAW0 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
BRF2Q9HAW0 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.59□□□□□ -1.51
BRF2Q9HAW0 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
BRF2Q9HAW0 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.59□□□□□ -1.51
BRF2Q9HAW0 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
BRF2Q9HAW0 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.59□□□□□ -1.51
BRF2Q9HAW0 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
BRF2Q9HAW0 U3.10-201ENST00000364459 214 ntBASIC5.59□□□□□ -1.51
BRF2Q9HAW0 RPL5P19-201ENST00000404228 893 ntBASIC5.59□□□□□ -1.51
BRF2Q9HAW0 AL590806.1-201ENST00000415818 853 ntBASIC5.59□□□□□ -1.51
BRF2Q9HAW0 NDUFA5P10-201ENST00000432147 357 ntBASIC5.59□□□□□ -1.51
BRF2Q9HAW0 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.59□□□□□ -1.51
BRF2Q9HAW0 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.59□□□□□ -1.51
BRF2Q9HAW0 EIF5AP4-201ENST00000441206 465 ntBASIC5.59□□□□□ -1.51
BRF2Q9HAW0 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.59□□□□□ -1.51
BRF2Q9HAW0 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.59□□□□□ -1.51
BRF2Q9HAW0 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
BRF2Q9HAW0 AC023194.2-201ENST00000465398 406 ntBASIC5.59□□□□□ -1.51
BRF2Q9HAW0 AC116562.1-201ENST00000485355 781 ntBASIC5.59□□□□□ -1.51
BRF2Q9HAW0 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.59□□□□□ -1.51
BRF2Q9HAW0 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.59□□□□□ -1.51
BRF2Q9HAW0 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.59□□□□□ -1.51
BRF2Q9HAW0 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.59□□□□□ -1.51
BRF2Q9HAW0 AC105384.2-201ENST00000508433 640 ntBASIC5.59□□□□□ -1.51
BRF2Q9HAW0 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.59□□□□□ -1.51
BRF2Q9HAW0 IGLVIV-66-1-201ENST00000521832 460 ntBASIC5.59□□□□□ -1.51
BRF2Q9HAW0 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.59□□□□□ -1.51
BRF2Q9HAW0 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.59□□□□□ -1.51
BRF2Q9HAW0 AC007956.1-201ENST00000555623 542 ntBASIC5.59□□□□□ -1.51
BRF2Q9HAW0 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.59□□□□□ -1.51
BRF2Q9HAW0 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.59□□□□□ -1.51
BRF2Q9HAW0 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.59□□□□□ -1.51
BRF2Q9HAW0 AC008507.3-201ENST00000585753 472 ntBASIC5.59□□□□□ -1.51
BRF2Q9HAW0 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
BRF2Q9HAW0 AC025857.2-201ENST00000602711 238 ntBASIC5.59□□□□□ -1.51
BRF2Q9HAW0 AL359091.2-201ENST00000609303 556 ntBASIC5.59□□□□□ -1.51
BRF2Q9HAW0 MIR6793-201ENST00000612376 63 ntBASIC5.59□□□□□ -1.51
BRF2Q9HAW0 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
BRF2Q9HAW0 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
BRF2Q9HAW0 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
BRF2Q9HAW0 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.59□□□□□ -1.51
BRF2Q9HAW0 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.59□□□□□ -1.51
BRF2Q9HAW0 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
BRF2Q9HAW0 PARP4P2-201ENST00000446672 3326 ntBASIC5.59□□□□□ -1.52
BRF2Q9HAW0 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
BRF2Q9HAW0 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.59□□□□□ -1.52
BRF2Q9HAW0 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
BRF2Q9HAW0 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
BRF2Q9HAW0 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
BRF2Q9HAW0 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.52
BRF2Q9HAW0 AC090181.3-201ENST00000624777 1514 ntBASIC5.58□□□□□ -1.52
BRF2Q9HAW0 ZNF90P1-201ENST00000480493 1951 ntBASIC5.58□□□□□ -1.52
BRF2Q9HAW0 AC027088.4-201ENST00000611559 1947 ntBASIC5.58□□□□□ -1.52
BRF2Q9HAW0 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 AL034546.1-201ENST00000623740 3693 ntBASIC5.58□□□□□ -1.52
BRF2Q9HAW0 PPBPP2-201ENST00000513150 1362 ntBASIC5.58□□□□□ -1.52
BRF2Q9HAW0 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 RNA5SP232-201ENST00000364144 119 ntBASIC5.58□□□□□ -1.52
BRF2Q9HAW0 RNU6-609P-201ENST00000365459 107 ntBASIC5.58□□□□□ -1.52
BRF2Q9HAW0 RNA5SP91-201ENST00000390902 119 ntBASIC5.58□□□□□ -1.52
BRF2Q9HAW0 CHMP1B2P-201ENST00000399581 597 ntBASIC5.58□□□□□ -1.52
BRF2Q9HAW0 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.58□□□□□ -1.52
BRF2Q9HAW0 AL122020.1-201ENST00000472287 459 ntBASIC5.58□□□□□ -1.52
BRF2Q9HAW0 NPM1P17-201ENST00000479221 602 ntBASIC5.58□□□□□ -1.52
BRF2Q9HAW0 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 RBBP4P1-201ENST00000502424 1276 ntBASIC5.58□□□□□ -1.52
BRF2Q9HAW0 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 AC136777.2-201ENST00000522979 358 ntBASIC5.58□□□□□ -1.52
BRF2Q9HAW0 WBP1LP3-201ENST00000523033 208 ntBASIC5.58□□□□□ -1.52
BRF2Q9HAW0 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms