Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM4Q9C037 AC104695.2-201ENST00000605056 775 ntBASIC5.71□□□□□ -1.5
TRIM4Q9C037 AC037198.3-201ENST00000616754 526 ntBASIC5.71□□□□□ -1.5
TRIM4Q9C037 AL355974.3-201ENST00000617383 467 ntBASIC5.71□□□□□ -1.5
TRIM4Q9C037 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM4Q9C037 SOCS5P3-201ENST00000425115 1576 ntBASIC5.71□□□□□ -1.5
TRIM4Q9C037 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM4Q9C037 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
TRIM4Q9C037 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM4Q9C037 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM4Q9C037 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM4Q9C037 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM4Q9C037 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM4Q9C037 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM4Q9C037 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM4Q9C037 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM4Q9C037 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM4Q9C037 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM4Q9C037 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM4Q9C037 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
TRIM4Q9C037 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM4Q9C037 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM4Q9C037 RNU105B-201ENST00000364478 208 ntBASIC5.7□□□□□ -1.5
TRIM4Q9C037 RNA5SP132-201ENST00000364725 118 ntBASIC5.7□□□□□ -1.5
TRIM4Q9C037 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.7□□□□□ -1.5
TRIM4Q9C037 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
TRIM4Q9C037 GPS2P1-201ENST00000411761 986 ntBASIC5.7□□□□□ -1.5
TRIM4Q9C037 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.7□□□□□ -1.5
TRIM4Q9C037 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.7□□□□□ -1.5
TRIM4Q9C037 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM4Q9C037 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.7□□□□□ -1.5
TRIM4Q9C037 AC002553.3-201ENST00000453002 341 ntBASIC5.7□□□□□ -1.5
TRIM4Q9C037 SDC4P-201ENST00000453285 601 ntBASIC5.7□□□□□ -1.5
TRIM4Q9C037 RAB28P2-201ENST00000454299 641 ntBASIC5.7□□□□□ -1.5
TRIM4Q9C037 RN7SL591P-201ENST00000496150 292 ntBASIC5.7□□□□□ -1.5
TRIM4Q9C037 AC090958.1-201ENST00000511122 351 ntBASIC5.7□□□□□ -1.5
TRIM4Q9C037 CR383658.1-201ENST00000514609 734 ntBASIC5.7□□□□□ -1.5
TRIM4Q9C037 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.7□□□□□ -1.5
TRIM4Q9C037 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM4Q9C037 AC116158.1-201ENST00000560231 2129 ntBASIC5.7□□□□□ -1.5
TRIM4Q9C037 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.7□□□□□ -1.5
TRIM4Q9C037 ELOCP28-201ENST00000590044 317 ntBASIC5.7□□□□□ -1.5
TRIM4Q9C037 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
TRIM4Q9C037 AP001823.1-201ENST00000604056 1003 ntBASIC5.7□□□□□ -1.5
TRIM4Q9C037 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.7□□□□□ -1.5
TRIM4Q9C037 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.7□□□□□ -1.5
TRIM4Q9C037 AL158152.1-201ENST00000602652 1435 ntBASIC5.7□□□□□ -1.5
TRIM4Q9C037 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.7□□□□□ -1.5
TRIM4Q9C037 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.7□□□□□ -1.5
TRIM4Q9C037 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM4Q9C037 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM4Q9C037 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM4Q9C037 AC005224.3-201ENST00000584683 2140 ntBASIC5.69□□□□□ -1.5
TRIM4Q9C037 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM4Q9C037 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM4Q9C037 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
TRIM4Q9C037 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM4Q9C037 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
TRIM4Q9C037 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM4Q9C037 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
TRIM4Q9C037 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM4Q9C037 RN7SKP128-201ENST00000364270 303 ntBASIC5.69□□□□□ -1.5
TRIM4Q9C037 RN7SKP59-201ENST00000410520 314 ntBASIC5.69□□□□□ -1.5
TRIM4Q9C037 RN7SKP166-201ENST00000410812 305 ntBASIC5.69□□□□□ -1.5
TRIM4Q9C037 NPM1P40-201ENST00000412758 733 ntBASIC5.69□□□□□ -1.5
TRIM4Q9C037 AL096829.1-201ENST00000413677 457 ntBASIC5.69□□□□□ -1.5
TRIM4Q9C037 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.69□□□□□ -1.5
TRIM4Q9C037 AL035660.1-201ENST00000422041 222 ntBASIC5.69□□□□□ -1.5
TRIM4Q9C037 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.69□□□□□ -1.5
TRIM4Q9C037 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.69□□□□□ -1.5
TRIM4Q9C037 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM4Q9C037 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM4Q9C037 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM4Q9C037 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM4Q9C037 AC231760.1-201ENST00000498002 260 ntBASIC5.69□□□□□ -1.5
TRIM4Q9C037 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM4Q9C037 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM4Q9C037 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM4Q9C037 GOLGA5P1-201ENST00000507317 980 ntBASIC5.69□□□□□ -1.5
TRIM4Q9C037 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM4Q9C037 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM4Q9C037 OR10G5P-201ENST00000532733 358 ntBASIC5.69□□□□□ -1.5
TRIM4Q9C037 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.69□□□□□ -1.5
TRIM4Q9C037 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM4Q9C037 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
TRIM4Q9C037 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM4Q9C037 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.69□□□□□ -1.5
TRIM4Q9C037 AC090236.2-201ENST00000587933 1101 ntBASIC5.69□□□□□ -1.5
TRIM4Q9C037 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC5.69□□□□□ -1.5
TRIM4Q9C037 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.69□□□□□ -1.5
TRIM4Q9C037 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM4Q9C037 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.69□□□□□ -1.5
TRIM4Q9C037 Z95331.1-201ENST00000623075 23112 ntBASIC5.69□□□□□ -1.5
TRIM4Q9C037 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM4Q9C037 SAMMSON-213ENST00000641336 1521 ntBASIC5.69□□□□□ -1.5
TRIM4Q9C037 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM4Q9C037 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.68□□□□□ -1.5
TRIM4Q9C037 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM4Q9C037 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
TRIM4Q9C037 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms