Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 RN7SL690P-201ENST00000582087 240 ntBASIC6.86□□□□□ -1.31
SHANK3Q9BYB0 AC108738.1-201ENST00000603703 237 ntBASIC6.86□□□□□ -1.31
SHANK3Q9BYB0 AP005131.7-201ENST00000610087 611 ntBASIC6.86□□□□□ -1.31
SHANK3Q9BYB0 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SHANK3Q9BYB0 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SHANK3Q9BYB0 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SHANK3Q9BYB0 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
SHANK3Q9BYB0 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SHANK3Q9BYB0 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
SHANK3Q9BYB0 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SHANK3Q9BYB0 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC6.85□□□□□ -1.31
SHANK3Q9BYB0 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SHANK3Q9BYB0 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
SHANK3Q9BYB0 AC079741.1-201ENST00000321498 212 ntBASIC6.85□□□□□ -1.31
SHANK3Q9BYB0 CHMP1B2P-201ENST00000399581 597 ntBASIC6.85□□□□□ -1.31
SHANK3Q9BYB0 MIR1182-201ENST00000408363 97 ntBASIC6.85□□□□□ -1.31
SHANK3Q9BYB0 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC6.85□□□□□ -1.31
SHANK3Q9BYB0 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC6.85□□□□□ -1.31
SHANK3Q9BYB0 RN7SL814P-201ENST00000487715 300 ntBASIC6.85□□□□□ -1.31
SHANK3Q9BYB0 FTH1P8-201ENST00000498161 514 ntBASIC6.85□□□□□ -1.31
SHANK3Q9BYB0 AC091912.1-201ENST00000511351 248 ntBASIC6.85□□□□□ -1.31
SHANK3Q9BYB0 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.85□□□□□ -1.31
SHANK3Q9BYB0 AP002981.1-201ENST00000517692 975 ntBASIC6.85□□□□□ -1.31
SHANK3Q9BYB0 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.85□□□□□ -1.31
SHANK3Q9BYB0 NPM1P42-201ENST00000560329 862 ntBASIC6.85□□□□□ -1.31
SHANK3Q9BYB0 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.85□□□□□ -1.31
SHANK3Q9BYB0 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.85□□□□□ -1.31
SHANK3Q9BYB0 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SHANK3Q9BYB0 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.85□□□□□ -1.31
SHANK3Q9BYB0 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC6.85□□□□□ -1.31
SHANK3Q9BYB0 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SHANK3Q9BYB0 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SHANK3Q9BYB0 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SHANK3Q9BYB0 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SHANK3Q9BYB0 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SHANK3Q9BYB0 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.85□□□□□ -1.31
SHANK3Q9BYB0 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC6.85□□□□□ -1.31
SHANK3Q9BYB0 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
SHANK3Q9BYB0 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 SNORA57.1-201ENST00000391227 145 ntBASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 GLULP6-201ENST00000399502 913 ntBASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 RPL23AP17-201ENST00000401064 499 ntBASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 CDC27P1-201ENST00000445384 715 ntBASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 COX6B1P5-201ENST00000509843 249 ntBASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 GAPDHP62-201ENST00000515313 990 ntBASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 AC105129.1-201ENST00000560250 297 ntBASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 MIR4284-201ENST00000578924 81 ntBASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 AC005252.1-201ENST00000604518 1063 ntBASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 AP001521.2-201ENST00000608772 546 ntBASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 RN7SKP100-201ENST00000411258 284 ntBASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 AC092570.3-201ENST00000420113 693 ntBASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 AL590399.4-201ENST00000436561 601 ntBASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 AL390879.1-201ENST00000439143 386 ntBASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 RBMY2TP-201ENST00000451162 947 ntBASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 RPL7AP10-201ENST00000481016 791 ntBASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 RN7SKP122-201ENST00000515923 296 ntBASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 AC060780.2-201ENST00000589047 198 ntBASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 OR52H1-202ENST00000641796 1061 ntBASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC6.84□□□□□ -1.31
SHANK3Q9BYB0 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.84□□□□□ -1.32
SHANK3Q9BYB0 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.32
SHANK3Q9BYB0 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
SHANK3Q9BYB0 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.84□□□□□ -1.32
SHANK3Q9BYB0 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.32
SHANK3Q9BYB0 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SHANK3Q9BYB0 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SHANK3Q9BYB0 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SHANK3Q9BYB0 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SHANK3Q9BYB0 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SHANK3Q9BYB0 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.83□□□□□ -1.32
SHANK3Q9BYB0 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
SHANK3Q9BYB0 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SHANK3Q9BYB0 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.83□□□□□ -1.32
SHANK3Q9BYB0 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
SHANK3Q9BYB0 RNA5SP90-201ENST00000364801 99 ntBASIC6.83□□□□□ -1.32
SHANK3Q9BYB0 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms