Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 RN7SL230P-201ENST00000580835 303 ntBASIC5.36□□□□□ -1.55
CCDC28BQ9BUN5 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC28BQ9BUN5 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC28BQ9BUN5 AC063977.5-201ENST00000601044 974 ntBASIC5.36□□□□□ -1.55
CCDC28BQ9BUN5 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.36□□□□□ -1.55
CCDC28BQ9BUN5 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC28BQ9BUN5 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC28BQ9BUN5 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.36□□□□□ -1.55
CCDC28BQ9BUN5 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC28BQ9BUN5 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC28BQ9BUN5 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC28BQ9BUN5 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC28BQ9BUN5 AC100778.3-201ENST00000580060 1750 ntBASIC5.36□□□□□ -1.55
CCDC28BQ9BUN5 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CCDC28BQ9BUN5 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CCDC28BQ9BUN5 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC28BQ9BUN5 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC28BQ9BUN5 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CCDC28BQ9BUN5 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC28BQ9BUN5 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC28BQ9BUN5 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC28BQ9BUN5 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 AL022322.2-201ENST00000624072 20397 ntBASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 SAMMSON-213ENST00000641336 1521 ntBASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 AC093225.1-201ENST00000506867 1408 ntBASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 PCNPP4-201ENST00000414817 517 ntBASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 AC104333.2-201ENST00000422630 192 ntBASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 AC064862.5-201ENST00000440618 334 ntBASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 RPL6P30-201ENST00000443382 862 ntBASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 AC091544.1-201ENST00000484702 348 ntBASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 RN7SKP35-201ENST00000517210 151 ntBASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 AC092266.1-201ENST00000610958 165 ntBASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 uc_338.31-201ENST00000615595 186 ntBASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 AC073869.8-201ENST00000641806 335 ntBASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 AC073869.10-201ENST00000642016 354 ntBASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC28BQ9BUN5 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.34□□□□□ -1.55
CCDC28BQ9BUN5 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
CCDC28BQ9BUN5 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC28BQ9BUN5 MAPK10-286ENST00000641208 8747 ntBASIC5.34□□□□□ -1.55
CCDC28BQ9BUN5 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.34□□□□□ -1.55
CCDC28BQ9BUN5 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CCDC28BQ9BUN5 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CCDC28BQ9BUN5 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC28BQ9BUN5 RN7SKP28-201ENST00000364770 305 ntBASIC5.34□□□□□ -1.55
CCDC28BQ9BUN5 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC28BQ9BUN5 MTATP6P19-201ENST00000413797 659 ntBASIC5.34□□□□□ -1.55
CCDC28BQ9BUN5 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC28BQ9BUN5 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC28BQ9BUN5 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.34□□□□□ -1.55
CCDC28BQ9BUN5 VN1R96P-201ENST00000446052 858 ntBASIC5.34□□□□□ -1.55
CCDC28BQ9BUN5 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC28BQ9BUN5 AL031584.1-201ENST00000447169 754 ntBASIC5.34□□□□□ -1.55
CCDC28BQ9BUN5 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC28BQ9BUN5 RNU6-775P-201ENST00000459318 96 ntBASIC5.34□□□□□ -1.55
CCDC28BQ9BUN5 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC28BQ9BUN5 RPSAP37-201ENST00000470913 821 ntBASIC5.34□□□□□ -1.55
CCDC28BQ9BUN5 RPL5P16-201ENST00000471467 790 ntBASIC5.34□□□□□ -1.55
CCDC28BQ9BUN5 AC022795.1-201ENST00000473808 480 ntBASIC5.34□□□□□ -1.55
CCDC28BQ9BUN5 RN7SL583P-201ENST00000475692 287 ntBASIC5.34□□□□□ -1.55
CCDC28BQ9BUN5 RN7SL193P-201ENST00000491708 276 ntBASIC5.34□□□□□ -1.55
CCDC28BQ9BUN5 RPS24P16-201ENST00000497294 392 ntBASIC5.34□□□□□ -1.55
CCDC28BQ9BUN5 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.34□□□□□ -1.55
CCDC28BQ9BUN5 RFPL4AP5-201ENST00000514977 504 ntBASIC5.34□□□□□ -1.55
CCDC28BQ9BUN5 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC28BQ9BUN5 OR10D4P-201ENST00000525892 951 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms