Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC084759.1-201ENST00000561168 290 ntBASIC4.98□□□□□ -1.61
SSX3Q99909 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC4.98□□□□□ -1.61
SSX3Q99909 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC4.98□□□□□ -1.61
SSX3Q99909 AL591167.1-201ENST00000607321 456 ntBASIC4.98□□□□□ -1.61
SSX3Q99909 AC020763.5-201ENST00000623298 430 ntBASIC4.98□□□□□ -1.61
SSX3Q99909 AC022400.9-201ENST00000623633 273 ntBASIC4.98□□□□□ -1.61
SSX3Q99909 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.98□□□□□ -1.61
SSX3Q99909 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.98□□□□□ -1.61
SSX3Q99909 AC116667.2-201ENST00000641075 823 ntBASIC4.98□□□□□ -1.61
SSX3Q99909 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SSX3Q99909 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSX3Q99909 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
SSX3Q99909 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC4.98□□□□□ -1.61
SSX3Q99909 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
SSX3Q99909 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSX3Q99909 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC4.98□□□□□ -1.61
SSX3Q99909 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SSX3Q99909 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SSX3Q99909 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSX3Q99909 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
SSX3Q99909 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSX3Q99909 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.97□□□□□ -1.61
SSX3Q99909 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
SSX3Q99909 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SSX3Q99909 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
SSX3Q99909 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
SSX3Q99909 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.97□□□□□ -1.61
SSX3Q99909 AC016583.1-201ENST00000624221 2431 ntBASIC4.97□□□□□ -1.61
SSX3Q99909 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SSX3Q99909 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
SSX3Q99909 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
SSX3Q99909 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.97□□□□□ -1.61
SSX3Q99909 AL354854.1-201ENST00000455940 1363 ntBASIC4.97□□□□□ -1.61
SSX3Q99909 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SSX3Q99909 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SSX3Q99909 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.97□□□□□ -1.61
SSX3Q99909 RPL35AP31-201ENST00000418340 337 ntBASIC4.97□□□□□ -1.61
SSX3Q99909 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC4.97□□□□□ -1.61
SSX3Q99909 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
SSX3Q99909 AC023141.3-201ENST00000436698 278 ntBASIC4.97□□□□□ -1.61
SSX3Q99909 RPL12P11-201ENST00000439970 501 ntBASIC4.97□□□□□ -1.61
SSX3Q99909 AC114878.1-201ENST00000441166 358 ntBASIC4.97□□□□□ -1.61
SSX3Q99909 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC4.97□□□□□ -1.61
SSX3Q99909 TXNP2-201ENST00000443918 295 ntBASIC4.97□□□□□ -1.61
SSX3Q99909 GAPDHP23-201ENST00000444823 993 ntBASIC4.97□□□□□ -1.61
SSX3Q99909 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.97□□□□□ -1.61
SSX3Q99909 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.97□□□□□ -1.61
SSX3Q99909 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC4.97□□□□□ -1.61
SSX3Q99909 AC104629.2-201ENST00000468627 598 ntBASIC4.97□□□□□ -1.61
SSX3Q99909 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC4.97□□□□□ -1.61
SSX3Q99909 CR383658.1-201ENST00000514609 734 ntBASIC4.97□□□□□ -1.61
SSX3Q99909 RFPL4AP5-201ENST00000514977 504 ntBASIC4.97□□□□□ -1.61
SSX3Q99909 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC4.97□□□□□ -1.61
SSX3Q99909 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.97□□□□□ -1.61
SSX3Q99909 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.97□□□□□ -1.61
SSX3Q99909 AC021269.1-201ENST00000526860 705 ntBASIC4.97□□□□□ -1.61
SSX3Q99909 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC4.97□□□□□ -1.61
SSX3Q99909 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC4.97□□□□□ -1.61
SSX3Q99909 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC4.97□□□□□ -1.61
SSX3Q99909 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.97□□□□□ -1.61
SSX3Q99909 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.97□□□□□ -1.61
SSX3Q99909 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC4.97□□□□□ -1.61
SSX3Q99909 AC090826.1-203ENST00000569235 490 ntBASIC4.97□□□□□ -1.61
SSX3Q99909 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.97□□□□□ -1.61
SSX3Q99909 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.97□□□□□ -1.61
SSX3Q99909 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.97□□□□□ -1.61
SSX3Q99909 BMS1P7-201ENST00000602440 1052 ntBASIC4.97□□□□□ -1.61
SSX3Q99909 AC067773.1-201ENST00000603284 1094 ntBASIC4.97□□□□□ -1.61
SSX3Q99909 FAM72A-208ENST00000607379 1139 ntBASIC4.97□□□□□ -1.61
SSX3Q99909 AC239803.2-201ENST00000610161 430 ntBASIC4.97□□□□□ -1.61
SSX3Q99909 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SSX3Q99909 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.97□□□□□ -1.61
SSX3Q99909 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.97□□□□□ -1.61
SSX3Q99909 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SSX3Q99909 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SSX3Q99909 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SSX3Q99909 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.97□□□□□ -1.61
SSX3Q99909 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
SSX3Q99909 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SSX3Q99909 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.97□□□□□ -1.61
SSX3Q99909 OR51C1P-202ENST00000641159 1444 ntBASIC4.97□□□□□ -1.61
SSX3Q99909 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC4.97□□□□□ -1.61
SSX3Q99909 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
SSX3Q99909 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.96□□□□□ -1.61
SSX3Q99909 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
SSX3Q99909 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SSX3Q99909 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.96□□□□□ -1.62
SSX3Q99909 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
SSX3Q99909 BTBD10P1-201ENST00000549824 1352 ntBASIC4.96□□□□□ -1.62
SSX3Q99909 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC4.96□□□□□ -1.62
SSX3Q99909 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SSX3Q99909 RN7SKP275-201ENST00000364626 301 ntBASIC4.96□□□□□ -1.62
SSX3Q99909 SNORA43.1-201ENST00000364863 140 ntBASIC4.96□□□□□ -1.62
SSX3Q99909 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC4.96□□□□□ -1.62
SSX3Q99909 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SSX3Q99909 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SSX3Q99909 RNU11-6P-201ENST00000391127 133 ntBASIC4.96□□□□□ -1.62
SSX3Q99909 AL034374.1-201ENST00000406329 351 ntBASIC4.96□□□□□ -1.62
SSX3Q99909 HSD17B7P1-201ENST00000412419 1017 ntBASIC4.96□□□□□ -1.62
SSX3Q99909 AL590806.1-201ENST00000415818 853 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms