Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
LITAFQ99732 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC4.06□□□□□ -1.76
LITAFQ99732 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
LITAFQ99732 DMD-228ENST00000541735 7080 ntTSL 5 BASIC4.06□□□□□ -1.76
LITAFQ99732 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
LITAFQ99732 OR1K1-201ENST00000277309 951 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
LITAFQ99732 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LITAFQ99732 PPIAP24-201ENST00000328558 471 ntBASIC4.06□□□□□ -1.76
LITAFQ99732 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
LITAFQ99732 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
LITAFQ99732 SNORD35A-201ENST00000363389 86 ntBASIC4.06□□□□□ -1.76
LITAFQ99732 RNU6-1214P-201ENST00000363650 109 ntBASIC4.06□□□□□ -1.76
LITAFQ99732 RNU4-92P-201ENST00000363783 136 ntBASIC4.06□□□□□ -1.76
LITAFQ99732 RNU4-51P-201ENST00000364206 140 ntBASIC4.06□□□□□ -1.76
LITAFQ99732 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
LITAFQ99732 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.06□□□□□ -1.76
LITAFQ99732 MRPS6P2-201ENST00000381143 370 ntBASIC4.06□□□□□ -1.76
LITAFQ99732 ZNF343-203ENST00000381253 819 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LITAFQ99732 PDCL3P5-201ENST00000398028 722 ntBASIC4.06□□□□□ -1.76
LITAFQ99732 SKINT1L-201ENST00000401057 817 ntBASIC4.06□□□□□ -1.76
LITAFQ99732 RN7SKP166-201ENST00000410812 305 ntBASIC4.06□□□□□ -1.76
LITAFQ99732 RN7SKP268-201ENST00000411107 316 ntBASIC4.06□□□□□ -1.76
LITAFQ99732 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.06□□□□□ -1.76
LITAFQ99732 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.06□□□□□ -1.76
LITAFQ99732 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC4.06□□□□□ -1.76
LITAFQ99732 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LITAFQ99732 AC093084.1-201ENST00000424233 687 ntBASIC4.06□□□□□ -1.76
LITAFQ99732 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
LITAFQ99732 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
LITAFQ99732 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC4.06□□□□□ -1.76
LITAFQ99732 OR6R1P-201ENST00000431838 940 ntBASIC4.06□□□□□ -1.76
LITAFQ99732 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.06□□□□□ -1.76
LITAFQ99732 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
LITAFQ99732 RPS10P18-201ENST00000442662 495 ntBASIC4.06□□□□□ -1.76
LITAFQ99732 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.06□□□□□ -1.76
LITAFQ99732 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LITAFQ99732 AC022080.2-201ENST00000452932 533 ntBASIC4.06□□□□□ -1.76
LITAFQ99732 AC244505.3-201ENST00000454598 187 ntBASIC4.06□□□□□ -1.76
LITAFQ99732 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
LITAFQ99732 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LITAFQ99732 RN7SL282P-201ENST00000479676 297 ntBASIC4.06□□□□□ -1.76
LITAFQ99732 ANK3-213ENST00000486349 493 ntTSL 2 BASIC4.06□□□□□ -1.76
LITAFQ99732 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC4.06□□□□□ -1.76
LITAFQ99732 GGTA1P-204ENST00000488429 1104 ntBASIC4.06□□□□□ -1.76
LITAFQ99732 OR7E157P-201ENST00000494376 911 ntBASIC4.06□□□□□ -1.76
LITAFQ99732 OR7E99P-201ENST00000505750 922 ntBASIC4.06□□□□□ -1.76
LITAFQ99732 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.06□□□□□ -1.76
LITAFQ99732 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.06□□□□□ -1.76
LITAFQ99732 PTPN20-219ENST00000508602 742 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LITAFQ99732 C4orf22-205ENST00000508675 753 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LITAFQ99732 PTPN20-221ENST00000509599 945 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LITAFQ99732 PTPN20-223ENST00000509900 693 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LITAFQ99732 PTPN20-228ENST00000513266 818 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LITAFQ99732 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
LITAFQ99732 AC092593.2-201ENST00000513866 913 ntBASIC4.06□□□□□ -1.76
LITAFQ99732 SNORA3.4-201ENST00000515969 96 ntBASIC4.06□□□□□ -1.76
LITAFQ99732 AC078899.1-201ENST00000521432 1185 ntBASIC4.06□□□□□ -1.76
LITAFQ99732 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.06□□□□□ -1.76
LITAFQ99732 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.06□□□□□ -1.76
LITAFQ99732 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LITAFQ99732 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC4.06□□□□□ -1.76
LITAFQ99732 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.06□□□□□ -1.76
LITAFQ99732 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC4.06□□□□□ -1.76
LITAFQ99732 AL049870.4-201ENST00000555741 486 ntBASIC4.06□□□□□ -1.76
LITAFQ99732 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC4.06□□□□□ -1.76
LITAFQ99732 TPRX1P1-201ENST00000557620 319 ntBASIC4.06□□□□□ -1.76
LITAFQ99732 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC4.06□□□□□ -1.76
LITAFQ99732 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC4.06□□□□□ -1.76
LITAFQ99732 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.06□□□□□ -1.76
LITAFQ99732 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.06□□□□□ -1.76
LITAFQ99732 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC4.06□□□□□ -1.76
LITAFQ99732 AC069366.1-201ENST00000583159 838 ntBASIC4.06□□□□□ -1.76
LITAFQ99732 MIR4664-201ENST00000583819 71 ntBASIC4.06□□□□□ -1.76
LITAFQ99732 AC010503.3-201ENST00000594355 540 ntBASIC4.06□□□□□ -1.76
LITAFQ99732 AC073046.2-201ENST00000604756 527 ntBASIC4.06□□□□□ -1.76
LITAFQ99732 AC018618.2-201ENST00000604770 446 ntBASIC4.06□□□□□ -1.76
LITAFQ99732 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC4.06□□□□□ -1.76
LITAFQ99732 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.06□□□□□ -1.76
LITAFQ99732 AC019131.2-201ENST00000609071 870 ntBASIC4.06□□□□□ -1.76
LITAFQ99732 AL139407.1-201ENST00000613826 1175 ntBASIC4.06□□□□□ -1.76
LITAFQ99732 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC4.06□□□□□ -1.76
LITAFQ99732 SNX18P12-201ENST00000624821 759 ntBASIC4.06□□□□□ -1.76
LITAFQ99732 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.06□□□□□ -1.76
LITAFQ99732 AL596275.2-207ENST00000641188 675 ntBASIC4.06□□□□□ -1.76
LITAFQ99732 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LITAFQ99732 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LITAFQ99732 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LITAFQ99732 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
LITAFQ99732 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
LITAFQ99732 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
LITAFQ99732 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LITAFQ99732 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC4.06□□□□□ -1.76
LITAFQ99732 AC090220.1-201ENST00000593078 1699 ntBASIC4.06□□□□□ -1.76
LITAFQ99732 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LITAFQ99732 AC120338.1-201ENST00000625074 1541 ntBASIC4.05□□□□□ -1.76
LITAFQ99732 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
LITAFQ99732 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LITAFQ99732 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
LITAFQ99732 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.05□□□□□ -1.76
LITAFQ99732 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms