Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 ELOCP9-201ENST00000418624 239 ntBASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 AL133325.1-201ENST00000421090 382 ntBASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 BX510359.3-201ENST00000422168 306 ntBASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 AC092017.2-201ENST00000427600 362 ntBASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 AL160175.1-201ENST00000428124 247 ntBASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 BX119904.1-201ENST00000432026 348 ntBASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 AC129850.1-201ENST00000436203 508 ntBASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 VN1R38P-201ENST00000450265 887 ntBASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 AC026414.1-201ENST00000504046 698 ntBASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 RNA5SP418-201ENST00000515951 117 ntBASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 ODF1-202ENST00000518835 368 ntTSL 3 BASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 AC068135.2-201ENST00000569293 1028 ntBASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 PRELID3BP3-201ENST00000584963 545 ntBASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 AL049840.5-201ENST00000602827 552 ntBASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 AC073137.1-201ENST00000605636 634 ntBASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 AC010333.3-201ENST00000615100 402 ntBASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 AC007494.3-201ENST00000624660 743 ntBASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 AL356121.2-201ENST00000624715 780 ntBASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 GLYATL1P1-201ENST00000528297 1607 ntBASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 CASC19-246ENST00000641625 1606 ntBASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 AC127070.3-201ENST00000503695 3263 ntBASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 AC104162.1-201ENST00000430831 2382 ntBASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 AC087392.3-202ENST00000358446 1754 ntBASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 AL590084.1-201ENST00000407885 387 ntBASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 Y_RNA.625-201ENST00000411256 107 ntBASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 AL158825.1-201ENST00000414735 521 ntBASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 OSTCP4-201ENST00000424397 449 ntBASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 AL593851.1-201ENST00000426171 157 ntBASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 HIGD1AP12-201ENST00000427832 281 ntBASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 AC245452.2-201ENST00000435222 392 ntBASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 HMGB3P6-201ENST00000444896 598 ntBASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 BZW1P1-201ENST00000454901 1240 ntBASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 FTH1P2-201ENST00000466086 412 ntBASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 AC131392.1-201ENST00000506490 633 ntBASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 AC104417.1-201ENST00000523974 751 ntBASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 AC090695.1-201ENST00000561269 1222 ntBASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 MTND4LP24-201ENST00000572277 291 ntBASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 AC090286.3-201ENST00000573133 187 ntBASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 CBX3P2-202ENST00000583365 535 ntBASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 AC125494.3-201ENST00000602759 455 ntBASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 AL020997.3-201ENST00000602843 359 ntBASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms