Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AP001823.1-201ENST00000604056 1003 ntBASIC5.92□□□□□ -1.46
VPS50Q96JG6 AC073046.2-201ENST00000604756 527 ntBASIC5.92□□□□□ -1.46
VPS50Q96JG6 AL022394.1-201ENST00000606979 292 ntBASIC5.92□□□□□ -1.46
VPS50Q96JG6 AL121652.1-201ENST00000608851 448 ntBASIC5.92□□□□□ -1.46
VPS50Q96JG6 AL008723.3-201ENST00000608926 449 ntBASIC5.92□□□□□ -1.46
VPS50Q96JG6 AC015922.4-201ENST00000612568 690 ntBASIC5.92□□□□□ -1.46
VPS50Q96JG6 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.92□□□□□ -1.46
VPS50Q96JG6 AP000770.2-201ENST00000623694 100 ntBASIC5.92□□□□□ -1.46
VPS50Q96JG6 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.92□□□□□ -1.46
VPS50Q96JG6 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.92□□□□□ -1.46
VPS50Q96JG6 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.92□□□□□ -1.46
VPS50Q96JG6 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
VPS50Q96JG6 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VPS50Q96JG6 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VPS50Q96JG6 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.92□□□□□ -1.46
VPS50Q96JG6 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VPS50Q96JG6 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
VPS50Q96JG6 CCNT2P1-201ENST00000423082 1315 ntBASIC5.92□□□□□ -1.46
VPS50Q96JG6 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VPS50Q96JG6 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
VPS50Q96JG6 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VPS50Q96JG6 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VPS50Q96JG6 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
VPS50Q96JG6 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VPS50Q96JG6 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
VPS50Q96JG6 AC245100.2-201ENST00000454544 1679 ntBASIC5.91□□□□□ -1.46
VPS50Q96JG6 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
VPS50Q96JG6 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
VPS50Q96JG6 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VPS50Q96JG6 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VPS50Q96JG6 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.91□□□□□ -1.46
VPS50Q96JG6 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.91□□□□□ -1.46
VPS50Q96JG6 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VPS50Q96JG6 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VPS50Q96JG6 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VPS50Q96JG6 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VPS50Q96JG6 TMEM161BP1-201ENST00000457388 1457 ntBASIC5.91□□□□□ -1.46
VPS50Q96JG6 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.91□□□□□ -1.46
VPS50Q96JG6 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
VPS50Q96JG6 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
VPS50Q96JG6 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VPS50Q96JG6 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
VPS50Q96JG6 SNORA5.1-201ENST00000384275 131 ntBASIC5.91□□□□□ -1.46
VPS50Q96JG6 MIR433-201ENST00000384837 93 ntBASIC5.91□□□□□ -1.46
VPS50Q96JG6 RNU6-584P-201ENST00000410350 95 ntBASIC5.91□□□□□ -1.46
VPS50Q96JG6 RNU4-27P-201ENST00000410889 139 ntBASIC5.91□□□□□ -1.46
VPS50Q96JG6 AL024507.1-201ENST00000412741 274 ntBASIC5.91□□□□□ -1.46
VPS50Q96JG6 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.91□□□□□ -1.46
VPS50Q96JG6 AC015977.1-201ENST00000418887 292 ntBASIC5.91□□□□□ -1.46
VPS50Q96JG6 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.91□□□□□ -1.46
VPS50Q96JG6 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.91□□□□□ -1.46
VPS50Q96JG6 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VPS50Q96JG6 RPSAP65-201ENST00000429660 595 ntBASIC5.91□□□□□ -1.46
VPS50Q96JG6 KCTD9P1-201ENST00000430462 1167 ntBASIC5.91□□□□□ -1.46
VPS50Q96JG6 BX276092.6-201ENST00000430476 250 ntBASIC5.91□□□□□ -1.46
VPS50Q96JG6 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC5.91□□□□□ -1.46
VPS50Q96JG6 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VPS50Q96JG6 AL606490.7-201ENST00000433136 191 ntBASIC5.91□□□□□ -1.46
VPS50Q96JG6 AC007563.3-201ENST00000433233 371 ntBASIC5.91□□□□□ -1.46
VPS50Q96JG6 AMYP1-201ENST00000440059 1023 ntBASIC5.91□□□□□ -1.46
VPS50Q96JG6 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VPS50Q96JG6 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VPS50Q96JG6 RNFT1P2-201ENST00000443064 757 ntBASIC5.91□□□□□ -1.46
VPS50Q96JG6 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC5.91□□□□□ -1.46
VPS50Q96JG6 MORF4-201ENST00000447135 971 ntBASIC5.91□□□□□ -1.46
VPS50Q96JG6 VPS25P1-201ENST00000455691 508 ntBASIC5.91□□□□□ -1.46
VPS50Q96JG6 BX276092.8-201ENST00000455722 250 ntBASIC5.91□□□□□ -1.46
VPS50Q96JG6 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.91□□□□□ -1.46
VPS50Q96JG6 AL035690.1-201ENST00000490892 383 ntBASIC5.91□□□□□ -1.46
VPS50Q96JG6 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.91□□□□□ -1.46
VPS50Q96JG6 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.91□□□□□ -1.46
VPS50Q96JG6 AC090958.1-201ENST00000511122 351 ntBASIC5.91□□□□□ -1.46
VPS50Q96JG6 AC020937.1-201ENST00000519677 1013 ntBASIC5.91□□□□□ -1.46
VPS50Q96JG6 AP003396.4-201ENST00000527574 265 ntBASIC5.91□□□□□ -1.46
VPS50Q96JG6 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.91□□□□□ -1.46
VPS50Q96JG6 AC004923.2-201ENST00000529649 369 ntBASIC5.91□□□□□ -1.46
VPS50Q96JG6 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.91□□□□□ -1.46
VPS50Q96JG6 ZKSCAN7P1-201ENST00000543668 673 ntBASIC5.91□□□□□ -1.46
VPS50Q96JG6 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.91□□□□□ -1.46
VPS50Q96JG6 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
VPS50Q96JG6 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.91□□□□□ -1.46
VPS50Q96JG6 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.91□□□□□ -1.46
VPS50Q96JG6 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.91□□□□□ -1.46
VPS50Q96JG6 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.91□□□□□ -1.46
VPS50Q96JG6 AC006116.5-201ENST00000591936 559 ntBASIC5.91□□□□□ -1.46
VPS50Q96JG6 AC005332.4-201ENST00000592752 579 ntBASIC5.91□□□□□ -1.46
VPS50Q96JG6 CLIC4P2-201ENST00000601934 717 ntBASIC5.91□□□□□ -1.46
VPS50Q96JG6 AL138895.2-201ENST00000603019 178 ntBASIC5.91□□□□□ -1.46
VPS50Q96JG6 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.91□□□□□ -1.46
VPS50Q96JG6 AC073333.2-201ENST00000603589 769 ntBASIC5.91□□□□□ -1.46
VPS50Q96JG6 AC124916.2-201ENST00000604416 224 ntBASIC5.91□□□□□ -1.46
VPS50Q96JG6 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.91□□□□□ -1.46
VPS50Q96JG6 AL096803.3-201ENST00000609032 532 ntBASIC5.91□□□□□ -1.46
VPS50Q96JG6 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.91□□□□□ -1.46
VPS50Q96JG6 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.91□□□□□ -1.46
VPS50Q96JG6 AC004241.3-201ENST00000611728 517 ntBASIC5.91□□□□□ -1.46
VPS50Q96JG6 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VPS50Q96JG6 AC073342.3-201ENST00000624211 193 ntBASIC5.91□□□□□ -1.46
VPS50Q96JG6 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.91□□□□□ -1.46
VPS50Q96JG6 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms