Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.8□□□□□ -1.32
ERCC4Q92889 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.8□□□□□ -1.32
ERCC4Q92889 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
ERCC4Q92889 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
ERCC4Q92889 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
ERCC4Q92889 MTCO2P31-201ENST00000402702 684 ntBASIC6.8□□□□□ -1.32
ERCC4Q92889 OR51B3P-201ENST00000412287 913 ntBASIC6.8□□□□□ -1.32
ERCC4Q92889 MTATP6P20-201ENST00000414147 562 ntBASIC6.8□□□□□ -1.32
ERCC4Q92889 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.8□□□□□ -1.32
ERCC4Q92889 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.8□□□□□ -1.32
ERCC4Q92889 MTCO2P21-201ENST00000419780 677 ntBASIC6.8□□□□□ -1.32
ERCC4Q92889 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.8□□□□□ -1.32
ERCC4Q92889 MGAT2P2-201ENST00000427194 797 ntBASIC6.8□□□□□ -1.32
ERCC4Q92889 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.8□□□□□ -1.32
ERCC4Q92889 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.8□□□□□ -1.32
ERCC4Q92889 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
ERCC4Q92889 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
ERCC4Q92889 AC099670.1-201ENST00000455141 783 ntBASIC6.8□□□□□ -1.32
ERCC4Q92889 YRDCP3-201ENST00000456507 480 ntBASIC6.8□□□□□ -1.32
ERCC4Q92889 AC105918.1-201ENST00000474399 838 ntBASIC6.8□□□□□ -1.32
ERCC4Q92889 AC044810.1-201ENST00000480271 711 ntBASIC6.8□□□□□ -1.32
ERCC4Q92889 AC022325.1-201ENST00000502748 2199 ntBASIC6.8□□□□□ -1.32
ERCC4Q92889 HMGB1P3-201ENST00000502802 616 ntBASIC6.8□□□□□ -1.32
ERCC4Q92889 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.8□□□□□ -1.32
ERCC4Q92889 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC6.8□□□□□ -1.32
ERCC4Q92889 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.8□□□□□ -1.32
ERCC4Q92889 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.8□□□□□ -1.32
ERCC4Q92889 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.8□□□□□ -1.32
ERCC4Q92889 AC124891.1-201ENST00000536322 519 ntBASIC6.8□□□□□ -1.32
ERCC4Q92889 AC135279.1-201ENST00000543493 504 ntBASIC6.8□□□□□ -1.32
ERCC4Q92889 TDGP1-201ENST00000543961 1229 ntBASIC6.8□□□□□ -1.32
ERCC4Q92889 MTCYBP27-201ENST00000555160 670 ntBASIC6.8□□□□□ -1.32
ERCC4Q92889 DHFRP1-201ENST00000579682 559 ntBASIC6.8□□□□□ -1.32
ERCC4Q92889 AL022067.1-201ENST00000602426 454 ntBASIC6.8□□□□□ -1.32
ERCC4Q92889 QTRT1P1-201ENST00000604344 1078 ntBASIC6.8□□□□□ -1.32
ERCC4Q92889 AP002802.2-201ENST00000605877 235 ntBASIC6.8□□□□□ -1.32
ERCC4Q92889 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.8□□□□□ -1.32
ERCC4Q92889 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC6.8□□□□□ -1.32
ERCC4Q92889 AC090617.9-201ENST00000623751 147 ntBASIC6.8□□□□□ -1.32
ERCC4Q92889 AC026422.1-201ENST00000623961 452 ntBASIC6.8□□□□□ -1.32
ERCC4Q92889 AP002967.1-201ENST00000624203 539 ntBASIC6.8□□□□□ -1.32
ERCC4Q92889 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.8□□□□□ -1.32
ERCC4Q92889 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.8□□□□□ -1.32
ERCC4Q92889 AC005224.3-201ENST00000584683 2140 ntBASIC6.8□□□□□ -1.32
ERCC4Q92889 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
ERCC4Q92889 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
ERCC4Q92889 AC140134.1-201ENST00000511830 3544 ntBASIC6.8□□□□□ -1.32
ERCC4Q92889 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
ERCC4Q92889 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
ERCC4Q92889 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.79□□□□□ -1.32
ERCC4Q92889 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
ERCC4Q92889 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
ERCC4Q92889 KYNUP3-201ENST00000574386 1341 ntBASIC6.79□□□□□ -1.32
ERCC4Q92889 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
ERCC4Q92889 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
ERCC4Q92889 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.79□□□□□ -1.32
ERCC4Q92889 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
ERCC4Q92889 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
ERCC4Q92889 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
ERCC4Q92889 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
ERCC4Q92889 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.79□□□□□ -1.32
ERCC4Q92889 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
ERCC4Q92889 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.79□□□□□ -1.32
ERCC4Q92889 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
ERCC4Q92889 RNU6-468P-201ENST00000384003 109 ntBASIC6.79□□□□□ -1.32
ERCC4Q92889 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
ERCC4Q92889 AL133260.1-201ENST00000405720 405 ntBASIC6.79□□□□□ -1.32
ERCC4Q92889 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
ERCC4Q92889 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.79□□□□□ -1.32
ERCC4Q92889 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.79□□□□□ -1.32
ERCC4Q92889 AL360013.1-201ENST00000419031 858 ntBASIC6.79□□□□□ -1.32
ERCC4Q92889 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC6.79□□□□□ -1.32
ERCC4Q92889 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
ERCC4Q92889 RPL12P16-201ENST00000431098 498 ntBASIC6.79□□□□□ -1.32
ERCC4Q92889 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.79□□□□□ -1.32
ERCC4Q92889 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
ERCC4Q92889 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC6.79□□□□□ -1.32
ERCC4Q92889 AC096632.2-201ENST00000438139 1239 ntBASIC6.79□□□□□ -1.32
ERCC4Q92889 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC6.79□□□□□ -1.32
ERCC4Q92889 MTND2P22-201ENST00000444325 1033 ntBASIC6.79□□□□□ -1.32
ERCC4Q92889 POU5F1P5-201ENST00000445059 658 ntBASIC6.79□□□□□ -1.32
ERCC4Q92889 AC234771.2-201ENST00000445718 597 ntBASIC6.79□□□□□ -1.32
ERCC4Q92889 ZNF619P1-201ENST00000446539 752 ntBASIC6.79□□□□□ -1.32
ERCC4Q92889 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC6.79□□□□□ -1.32
ERCC4Q92889 HMGB1P26-201ENST00000452520 628 ntBASIC6.79□□□□□ -1.32
ERCC4Q92889 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.79□□□□□ -1.32
ERCC4Q92889 RBMY2HP-201ENST00000457961 720 ntBASIC6.79□□□□□ -1.32
ERCC4Q92889 AC005165.2-201ENST00000466070 380 ntBASIC6.79□□□□□ -1.32
ERCC4Q92889 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.79□□□□□ -1.32
ERCC4Q92889 SNX18P25-201ENST00000510539 758 ntBASIC6.79□□□□□ -1.32
ERCC4Q92889 KHDC1P1-201ENST00000511053 508 ntBASIC6.79□□□□□ -1.32
ERCC4Q92889 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.79□□□□□ -1.32
ERCC4Q92889 SNORA70.11-201ENST00000515987 138 ntBASIC6.79□□□□□ -1.32
ERCC4Q92889 RNU6-319P-201ENST00000516025 108 ntBASIC6.79□□□□□ -1.32
ERCC4Q92889 SNORA70.13-201ENST00000516116 138 ntBASIC6.79□□□□□ -1.32
ERCC4Q92889 RN7SKP288-201ENST00000516227 268 ntBASIC6.79□□□□□ -1.32
ERCC4Q92889 AC067904.2-201ENST00000517322 1283 ntBASIC6.79□□□□□ -1.32
ERCC4Q92889 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC6.79□□□□□ -1.32
ERCC4Q92889 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.79□□□□□ -1.32
ERCC4Q92889 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms