Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.59□□□□□ -1.51
SHROOM3Q8TF72 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.59□□□□□ -1.51
SHROOM3Q8TF72 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SHROOM3Q8TF72 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
SHROOM3Q8TF72 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SHROOM3Q8TF72 AL592429.1-201ENST00000403909 1473 ntBASIC5.59□□□□□ -1.51
SHROOM3Q8TF72 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.59□□□□□ -1.51
SHROOM3Q8TF72 RMRPP5-201ENST00000411156 267 ntBASIC5.59□□□□□ -1.51
SHROOM3Q8TF72 RN7SKP273-201ENST00000411392 314 ntBASIC5.59□□□□□ -1.51
SHROOM3Q8TF72 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.59□□□□□ -1.51
SHROOM3Q8TF72 TPT1P12-201ENST00000448968 492 ntBASIC5.59□□□□□ -1.51
SHROOM3Q8TF72 AL672138.1-201ENST00000450604 1015 ntBASIC5.59□□□□□ -1.51
SHROOM3Q8TF72 AC090058.1-201ENST00000498788 435 ntBASIC5.59□□□□□ -1.51
SHROOM3Q8TF72 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.59□□□□□ -1.51
SHROOM3Q8TF72 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.59□□□□□ -1.51
SHROOM3Q8TF72 AC018552.1-201ENST00000562099 811 ntBASIC5.59□□□□□ -1.51
SHROOM3Q8TF72 AC007786.3-201ENST00000615154 596 ntBASIC5.59□□□□□ -1.51
SHROOM3Q8TF72 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.59□□□□□ -1.51
SHROOM3Q8TF72 AC132068.1-201ENST00000623805 459 ntBASIC5.59□□□□□ -1.51
SHROOM3Q8TF72 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.59□□□□□ -1.51
SHROOM3Q8TF72 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SHROOM3Q8TF72 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SHROOM3Q8TF72 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SHROOM3Q8TF72 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.59□□□□□ -1.51
SHROOM3Q8TF72 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SHROOM3Q8TF72 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SHROOM3Q8TF72 UGT2B24P-201ENST00000514441 1597 ntBASIC5.59□□□□□ -1.52
SHROOM3Q8TF72 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.58□□□□□ -1.52
SHROOM3Q8TF72 AC092451.3-201ENST00000625067 1343 ntBASIC5.58□□□□□ -1.52
SHROOM3Q8TF72 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SHROOM3Q8TF72 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC5.58□□□□□ -1.52
SHROOM3Q8TF72 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.58□□□□□ -1.52
SHROOM3Q8TF72 EEF1B2P5-201ENST00000444820 548 ntBASIC5.58□□□□□ -1.52
SHROOM3Q8TF72 GYG1P1-201ENST00000460864 698 ntBASIC5.58□□□□□ -1.52
SHROOM3Q8TF72 RPL7P6-201ENST00000480903 738 ntBASIC5.58□□□□□ -1.52
SHROOM3Q8TF72 ATP5LP5-201ENST00000483050 299 ntBASIC5.58□□□□□ -1.52
SHROOM3Q8TF72 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.58□□□□□ -1.52
SHROOM3Q8TF72 OR51K1P-201ENST00000510214 950 ntBASIC5.58□□□□□ -1.52
SHROOM3Q8TF72 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.58□□□□□ -1.52
SHROOM3Q8TF72 AL512310.9-201ENST00000553311 948 ntBASIC5.58□□□□□ -1.52
SHROOM3Q8TF72 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.58□□□□□ -1.52
SHROOM3Q8TF72 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.58□□□□□ -1.52
SHROOM3Q8TF72 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.58□□□□□ -1.52
SHROOM3Q8TF72 MIR4436B2-201ENST00000581415 91 ntBASIC5.58□□□□□ -1.52
SHROOM3Q8TF72 MIR4436B1-201ENST00000583272 91 ntBASIC5.58□□□□□ -1.52
SHROOM3Q8TF72 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.58□□□□□ -1.52
SHROOM3Q8TF72 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.58□□□□□ -1.52
SHROOM3Q8TF72 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.58□□□□□ -1.52
SHROOM3Q8TF72 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.58□□□□□ -1.52
SHROOM3Q8TF72 SAMMSON-227ENST00000642114 1199 ntBASIC5.58□□□□□ -1.52
SHROOM3Q8TF72 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SHROOM3Q8TF72 ZNF402P-201ENST00000404435 3100 ntBASIC5.58□□□□□ -1.52
SHROOM3Q8TF72 AL137058.3-201ENST00000624531 3099 ntBASIC5.58□□□□□ -1.52
SHROOM3Q8TF72 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SHROOM3Q8TF72 SAMM50P1-201ENST00000455403 1399 ntBASIC5.58□□□□□ -1.52
SHROOM3Q8TF72 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SHROOM3Q8TF72 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.58□□□□□ -1.52
SHROOM3Q8TF72 CEACAMP7-201ENST00000444105 496 ntBASIC5.58□□□□□ -1.52
SHROOM3Q8TF72 GAPDHP25-201ENST00000447061 1001 ntBASIC5.58□□□□□ -1.52
SHROOM3Q8TF72 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.58□□□□□ -1.52
SHROOM3Q8TF72 AP001922.4-201ENST00000526967 290 ntBASIC5.58□□□□□ -1.52
SHROOM3Q8TF72 NMNAT1P5-201ENST00000559657 841 ntBASIC5.58□□□□□ -1.52
SHROOM3Q8TF72 RN7SL356P-201ENST00000582228 248 ntBASIC5.58□□□□□ -1.52
SHROOM3Q8TF72 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.58□□□□□ -1.52
SHROOM3Q8TF72 AL022394.1-201ENST00000606979 292 ntBASIC5.58□□□□□ -1.52
SHROOM3Q8TF72 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.58□□□□□ -1.52
SHROOM3Q8TF72 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SHROOM3Q8TF72 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SHROOM3Q8TF72 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.57□□□□□ -1.52
SHROOM3Q8TF72 AC100757.1-201ENST00000616872 1835 ntBASIC5.57□□□□□ -1.52
SHROOM3Q8TF72 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SHROOM3Q8TF72 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.57□□□□□ -1.52
SHROOM3Q8TF72 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.57□□□□□ -1.52
SHROOM3Q8TF72 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHROOM3Q8TF72 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHROOM3Q8TF72 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.57□□□□□ -1.52
SHROOM3Q8TF72 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHROOM3Q8TF72 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHROOM3Q8TF72 AC016397.1-201ENST00000412463 242 ntBASIC5.57□□□□□ -1.52
SHROOM3Q8TF72 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.57□□□□□ -1.52
SHROOM3Q8TF72 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.57□□□□□ -1.52
SHROOM3Q8TF72 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.57□□□□□ -1.52
SHROOM3Q8TF72 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.57□□□□□ -1.52
SHROOM3Q8TF72 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.57□□□□□ -1.52
SHROOM3Q8TF72 LDHBP2-201ENST00000456969 1005 ntBASIC5.57□□□□□ -1.52
SHROOM3Q8TF72 AC090142.2-201ENST00000483263 416 ntBASIC5.57□□□□□ -1.52
SHROOM3Q8TF72 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.57□□□□□ -1.52
SHROOM3Q8TF72 AC110775.1-201ENST00000513721 462 ntBASIC5.57□□□□□ -1.52
SHROOM3Q8TF72 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.57□□□□□ -1.52
SHROOM3Q8TF72 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.57□□□□□ -1.52
SHROOM3Q8TF72 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.57□□□□□ -1.52
SHROOM3Q8TF72 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.57□□□□□ -1.52
SHROOM3Q8TF72 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.57□□□□□ -1.52
SHROOM3Q8TF72 AC109583.2-201ENST00000617367 129 ntBASIC5.57□□□□□ -1.52
SHROOM3Q8TF72 MIR7641-1-201ENST00000627518 61 ntBASIC5.57□□□□□ -1.52
SHROOM3Q8TF72 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.57□□□□□ -1.52
SHROOM3Q8TF72 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHROOM3Q8TF72 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
SHROOM3Q8TF72 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.57□□□□□ -1.52
SHROOM3Q8TF72 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms