Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 AC005341.1-201ENST00000571086 708 ntBASIC8.36□□□□□ -1.07
CFAP43Q8NDM7 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC8.36□□□□□ -1.07
CFAP43Q8NDM7 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC8.36□□□□□ -1.07
CFAP43Q8NDM7 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC8.36□□□□□ -1.07
CFAP43Q8NDM7 AP001267.4-201ENST00000602598 545 ntBASIC8.36□□□□□ -1.07
CFAP43Q8NDM7 AL031320.1-201ENST00000604177 357 ntBASIC8.36□□□□□ -1.07
CFAP43Q8NDM7 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
CFAP43Q8NDM7 THAP12P4-201ENST00000528321 2266 ntBASIC8.36□□□□□ -1.07
CFAP43Q8NDM7 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
CFAP43Q8NDM7 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
CFAP43Q8NDM7 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
CFAP43Q8NDM7 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CFAP43Q8NDM7 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC8.36□□□□□ -1.07
CFAP43Q8NDM7 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC8.36□□□□□ -1.07
CFAP43Q8NDM7 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
CFAP43Q8NDM7 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CFAP43Q8NDM7 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
CFAP43Q8NDM7 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
CFAP43Q8NDM7 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC8.35□□□□□ -1.07
CFAP43Q8NDM7 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC8.35□□□□□ -1.07
CFAP43Q8NDM7 PPIAP9-201ENST00000403866 498 ntBASIC8.35□□□□□ -1.07
CFAP43Q8NDM7 PRPF38AP2-201ENST00000438179 851 ntBASIC8.35□□□□□ -1.07
CFAP43Q8NDM7 NDUFA12P1-201ENST00000455914 406 ntBASIC8.35□□□□□ -1.07
CFAP43Q8NDM7 snoU13.20-201ENST00000459180 104 ntBASIC8.35□□□□□ -1.07
CFAP43Q8NDM7 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC8.35□□□□□ -1.07
CFAP43Q8NDM7 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC8.35□□□□□ -1.07
CFAP43Q8NDM7 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC8.35□□□□□ -1.07
CFAP43Q8NDM7 AP000919.1-201ENST00000582850 985 ntBASIC8.35□□□□□ -1.07
CFAP43Q8NDM7 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CFAP43Q8NDM7 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC8.35□□□□□ -1.07
CFAP43Q8NDM7 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC8.35□□□□□ -1.07
CFAP43Q8NDM7 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CFAP43Q8NDM7 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC8.35□□□□□ -1.07
CFAP43Q8NDM7 AL355834.1-201ENST00000556602 3965 ntBASIC8.35□□□□□ -1.07
CFAP43Q8NDM7 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC8.35□□□□□ -1.07
CFAP43Q8NDM7 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
CFAP43Q8NDM7 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC8.34□□□□□ -1.07
CFAP43Q8NDM7 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
CFAP43Q8NDM7 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CFAP43Q8NDM7 AL009179.1-201ENST00000406085 265 ntBASIC8.34□□□□□ -1.07
CFAP43Q8NDM7 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC8.34□□□□□ -1.07
CFAP43Q8NDM7 IGHVIII-47-1-201ENST00000518187 331 ntBASIC8.34□□□□□ -1.07
CFAP43Q8NDM7 AC134349.2-201ENST00000535136 910 ntBASIC8.34□□□□□ -1.07
CFAP43Q8NDM7 AC018558.5-201ENST00000565840 952 ntBASIC8.34□□□□□ -1.07
CFAP43Q8NDM7 AC060766.1-201ENST00000590824 627 ntBASIC8.34□□□□□ -1.07
CFAP43Q8NDM7 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC8.34□□□□□ -1.07
CFAP43Q8NDM7 EIF3FP1-201ENST00000613970 806 ntBASIC8.34□□□□□ -1.07
CFAP43Q8NDM7 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC8.34□□□□□ -1.07
CFAP43Q8NDM7 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CFAP43Q8NDM7 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC8.34□□□□□ -1.07
CFAP43Q8NDM7 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
CFAP43Q8NDM7 MIPEPP2-201ENST00000422560 1819 ntBASIC8.34□□□□□ -1.07
CFAP43Q8NDM7 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC8.34□□□□□ -1.07
CFAP43Q8NDM7 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CFAP43Q8NDM7 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CFAP43Q8NDM7 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
CFAP43Q8NDM7 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CFAP43Q8NDM7 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC8.34□□□□□ -1.08
CFAP43Q8NDM7 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
CFAP43Q8NDM7 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC8.34□□□□□ -1.08
CFAP43Q8NDM7 RN7SL814P-201ENST00000487715 300 ntBASIC8.34□□□□□ -1.08
CFAP43Q8NDM7 IGBP1P5-201ENST00000507524 1000 ntBASIC8.34□□□□□ -1.08
CFAP43Q8NDM7 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC8.34□□□□□ -1.08
CFAP43Q8NDM7 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC8.34□□□□□ -1.08
CFAP43Q8NDM7 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC8.34□□□□□ -1.08
CFAP43Q8NDM7 UBE2FP2-201ENST00000566646 462 ntBASIC8.34□□□□□ -1.08
CFAP43Q8NDM7 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.08
CFAP43Q8NDM7 AC008814.1-201ENST00000603797 406 ntBASIC8.34□□□□□ -1.08
CFAP43Q8NDM7 AC104687.2-201ENST00000604442 342 ntBASIC8.34□□□□□ -1.08
CFAP43Q8NDM7 AC244107.2-201ENST00000611773 76 ntBASIC8.34□□□□□ -1.08
CFAP43Q8NDM7 AL161616.1-201ENST00000611867 286 ntBASIC8.34□□□□□ -1.08
CFAP43Q8NDM7 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
CFAP43Q8NDM7 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
CFAP43Q8NDM7 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
CFAP43Q8NDM7 AC099494.2-201ENST00000623371 978 ntBASIC8.34□□□□□ -1.08
CFAP43Q8NDM7 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CFAP43Q8NDM7 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CFAP43Q8NDM7 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC8.33□□□□□ -1.08
CFAP43Q8NDM7 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC8.33□□□□□ -1.08
CFAP43Q8NDM7 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CFAP43Q8NDM7 SNORA62-201ENST00000365493 153 ntBASIC8.33□□□□□ -1.08
CFAP43Q8NDM7 GAPDHP15-201ENST00000398586 975 ntBASIC8.33□□□□□ -1.08
CFAP43Q8NDM7 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC8.33□□□□□ -1.08
CFAP43Q8NDM7 OR5M12P-201ENST00000423388 929 ntBASIC8.33□□□□□ -1.08
CFAP43Q8NDM7 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CFAP43Q8NDM7 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC8.33□□□□□ -1.08
CFAP43Q8NDM7 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC8.33□□□□□ -1.08
CFAP43Q8NDM7 GTF2F2P1-201ENST00000511083 675 ntBASIC8.33□□□□□ -1.08
CFAP43Q8NDM7 SCARNA20.4-201ENST00000516969 131 ntBASIC8.33□□□□□ -1.08
CFAP43Q8NDM7 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC8.33□□□□□ -1.08
CFAP43Q8NDM7 OR4A17P-201ENST00000526032 904 ntBASIC8.33□□□□□ -1.08
CFAP43Q8NDM7 PDCD6IPP2-207ENST00000566321 1069 ntBASIC8.33□□□□□ -1.08
CFAP43Q8NDM7 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC8.33□□□□□ -1.08
CFAP43Q8NDM7 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC8.33□□□□□ -1.08
CFAP43Q8NDM7 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC8.33□□□□□ -1.08
CFAP43Q8NDM7 IRF5P1-201ENST00000504852 2164 ntBASIC8.33□□□□□ -1.08
CFAP43Q8NDM7 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC8.32□□□□□ -1.08
CFAP43Q8NDM7 MAPK10-371ENST00000641952 5209 ntBASIC8.32□□□□□ -1.08
CFAP43Q8NDM7 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
CFAP43Q8NDM7 ALB-219ENST00000621085 1418 ntTSL 5 BASIC8.32□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms