Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 OR4G1P-202ENST00000641173 1788 ntBASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 NDUFA5P8-201ENST00000449019 346 ntBASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 MTND2P3-201ENST00000452458 470 ntBASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 MTND3P4-201ENST00000453537 303 ntBASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 AC093166.4-201ENST00000457867 318 ntBASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 RPS23P2-201ENST00000463671 415 ntBASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 HESX1-202ENST00000473921 757 ntTSL 5 BASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 TRBV8-1-201ENST00000481590 279 ntBASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 AC112184.1-201ENST00000505179 312 ntBASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 HMGB1P42-201ENST00000532126 553 ntBASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 AL359219.2-201ENST00000555184 348 ntBASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 AC015802.2-201ENST00000589690 189 ntBASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 AC245128.3-201ENST00000594721 748 ntBASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 AC011445.2-201ENST00000599274 173 ntBASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 RN7SL787P-201ENST00000613000 284 ntBASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 AL691477.1-201ENST00000624398 162 ntBASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 RNF19BPY-201ENST00000458209 1550 ntBASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.2□□□□□ -1.58
CHMP1BQ7LBR1 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 AL161756.3-201ENST00000641216 2071 ntBASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 AC003985.2-201ENST00000562268 1669 ntBASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 AL442128.2-201ENST00000620246 1824 ntBASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 MIR323B-201ENST00000385269 82 ntBASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 RPL11P3-201ENST00000395256 523 ntBASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 HMGB1P20-201ENST00000402555 677 ntBASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 RSL24D1P8-201ENST00000434442 492 ntBASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 MED28P3-201ENST00000444288 531 ntBASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 AL356390.1-201ENST00000455684 397 ntBASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 UBFD1P1-201ENST00000473259 814 ntBASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 RN7SL174P-201ENST00000475578 289 ntBASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 OR52A4P-202ENST00000481634 799 ntBASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 RPL38P3-201ENST00000484463 213 ntBASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 AC105420.1-201ENST00000504389 582 ntBASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 AC021678.3-201ENST00000517893 476 ntBASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 IGKV3D-34-201ENST00000522638 302 ntBASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 AC090424.1-201ENST00000535243 736 ntBASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 AC022404.1-201ENST00000555320 273 ntBASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 AL049872.1-201ENST00000556323 322 ntBASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 AC067805.1-201ENST00000559344 470 ntBASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.19□□□□□ -1.58
CHMP1BQ7LBR1 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms