Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 RNA5SP319-201ENST00000362768 119 ntBASIC6.61□□□□□ -1.35
CTR9Q6PD62 RN7SKP6-201ENST00000364795 319 ntBASIC6.61□□□□□ -1.35
CTR9Q6PD62 GTF3AP1-201ENST00000416942 1004 ntBASIC6.61□□□□□ -1.35
CTR9Q6PD62 RNF10P1-201ENST00000418589 369 ntBASIC6.61□□□□□ -1.35
CTR9Q6PD62 BX510359.3-201ENST00000422168 306 ntBASIC6.61□□□□□ -1.35
CTR9Q6PD62 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.61□□□□□ -1.35
CTR9Q6PD62 AC011225.1-201ENST00000457751 369 ntBASIC6.61□□□□□ -1.35
CTR9Q6PD62 RPS4XP12-201ENST00000461747 709 ntBASIC6.61□□□□□ -1.35
CTR9Q6PD62 AL133445.1-201ENST00000467051 452 ntBASIC6.61□□□□□ -1.35
CTR9Q6PD62 RN7SL177P-201ENST00000476596 299 ntBASIC6.61□□□□□ -1.35
CTR9Q6PD62 UBA52P7-201ENST00000486088 380 ntBASIC6.61□□□□□ -1.35
CTR9Q6PD62 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.61□□□□□ -1.35
CTR9Q6PD62 RERGL-202ENST00000536890 367 ntTSL 3 BASIC6.61□□□□□ -1.35
CTR9Q6PD62 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.61□□□□□ -1.35
CTR9Q6PD62 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CTR9Q6PD62 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.61□□□□□ -1.35
CTR9Q6PD62 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.61□□□□□ -1.35
CTR9Q6PD62 AC027216.1-201ENST00000577726 685 ntBASIC6.61□□□□□ -1.35
CTR9Q6PD62 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.61□□□□□ -1.35
CTR9Q6PD62 AC060780.2-201ENST00000589047 198 ntBASIC6.61□□□□□ -1.35
CTR9Q6PD62 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.61□□□□□ -1.35
CTR9Q6PD62 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CTR9Q6PD62 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
CTR9Q6PD62 AC003985.2-201ENST00000562268 1669 ntBASIC6.61□□□□□ -1.35
CTR9Q6PD62 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.61□□□□□ -1.35
CTR9Q6PD62 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.61□□□□□ -1.35
CTR9Q6PD62 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CTR9Q6PD62 Z83820.1-201ENST00000456978 1499 ntBASIC6.6□□□□□ -1.35
CTR9Q6PD62 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CTR9Q6PD62 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CTR9Q6PD62 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.6□□□□□ -1.35
CTR9Q6PD62 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CTR9Q6PD62 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CTR9Q6PD62 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
CTR9Q6PD62 AL121886.1-201ENST00000358609 435 ntBASIC6.6□□□□□ -1.35
CTR9Q6PD62 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.6□□□□□ -1.35
CTR9Q6PD62 METTL5-204ENST00000409340 472 ntTSL 5 BASIC6.6□□□□□ -1.35
CTR9Q6PD62 RN7SKP59-201ENST00000410520 314 ntBASIC6.6□□□□□ -1.35
CTR9Q6PD62 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.6□□□□□ -1.35
CTR9Q6PD62 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.6□□□□□ -1.35
CTR9Q6PD62 SPRYD7P1-201ENST00000443861 570 ntBASIC6.6□□□□□ -1.35
CTR9Q6PD62 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CTR9Q6PD62 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC6.6□□□□□ -1.35
CTR9Q6PD62 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.6□□□□□ -1.35
CTR9Q6PD62 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.6□□□□□ -1.35
CTR9Q6PD62 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.6□□□□□ -1.35
CTR9Q6PD62 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.6□□□□□ -1.35
CTR9Q6PD62 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CTR9Q6PD62 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.6□□□□□ -1.35
CTR9Q6PD62 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC6.6□□□□□ -1.35
CTR9Q6PD62 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.6□□□□□ -1.35
CTR9Q6PD62 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.6□□□□□ -1.35
CTR9Q6PD62 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.6□□□□□ -1.35
CTR9Q6PD62 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
CTR9Q6PD62 MIR6826-201ENST00000617808 98 ntBASIC6.6□□□□□ -1.35
CTR9Q6PD62 AC005840.5-201ENST00000619166 599 ntBASIC6.6□□□□□ -1.35
CTR9Q6PD62 AC073869.7-201ENST00000640874 297 ntBASIC6.6□□□□□ -1.35
CTR9Q6PD62 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
CTR9Q6PD62 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CTR9Q6PD62 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CTR9Q6PD62 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.6□□□□□ -1.35
CTR9Q6PD62 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.6□□□□□ -1.35
CTR9Q6PD62 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
CTR9Q6PD62 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.59□□□□□ -1.35
CTR9Q6PD62 PROS2P-201ENST00000474651 1951 ntBASIC6.59□□□□□ -1.35
CTR9Q6PD62 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.59□□□□□ -1.35
CTR9Q6PD62 OR9K1P-202ENST00000641111 3217 ntBASIC6.59□□□□□ -1.35
CTR9Q6PD62 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.59□□□□□ -1.35
CTR9Q6PD62 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
CTR9Q6PD62 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.59□□□□□ -1.35
CTR9Q6PD62 SNORA16A-201ENST00000384342 137 ntBASIC6.59□□□□□ -1.35
CTR9Q6PD62 MIR551A-201ENST00000385042 96 ntBASIC6.59□□□□□ -1.35
CTR9Q6PD62 METTL15P3-201ENST00000415522 1221 ntBASIC6.59□□□□□ -1.35
CTR9Q6PD62 AL158827.1-201ENST00000416300 391 ntBASIC6.59□□□□□ -1.35
CTR9Q6PD62 TRGV5P-201ENST00000419915 354 ntBASIC6.59□□□□□ -1.35
CTR9Q6PD62 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
CTR9Q6PD62 TMEM183AP1-205ENST00000432739 290 ntBASIC6.59□□□□□ -1.35
CTR9Q6PD62 BTG3P1-201ENST00000435859 716 ntBASIC6.59□□□□□ -1.35
CTR9Q6PD62 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.59□□□□□ -1.35
CTR9Q6PD62 RN7SL583P-201ENST00000475692 287 ntBASIC6.59□□□□□ -1.35
CTR9Q6PD62 CSNK1A1P3-201ENST00000504105 330 ntBASIC6.59□□□□□ -1.35
CTR9Q6PD62 SUMO2P4-201ENST00000504193 276 ntBASIC6.59□□□□□ -1.35
CTR9Q6PD62 ST13P12-201ENST00000508958 1094 ntBASIC6.59□□□□□ -1.35
CTR9Q6PD62 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.59□□□□□ -1.35
CTR9Q6PD62 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.59□□□□□ -1.35
CTR9Q6PD62 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.59□□□□□ -1.35
CTR9Q6PD62 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.59□□□□□ -1.35
CTR9Q6PD62 PMS2P3-207ENST00000529061 717 ntBASIC6.59□□□□□ -1.35
CTR9Q6PD62 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC6.59□□□□□ -1.35
CTR9Q6PD62 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
CTR9Q6PD62 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CTR9Q6PD62 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.59□□□□□ -1.35
CTR9Q6PD62 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.59□□□□□ -1.35
CTR9Q6PD62 FKBP1AP1-201ENST00000594588 318 ntBASIC6.59□□□□□ -1.35
CTR9Q6PD62 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.59□□□□□ -1.35
CTR9Q6PD62 AL034374.2-201ENST00000605281 548 ntBASIC6.59□□□□□ -1.35
CTR9Q6PD62 AC016252.1-201ENST00000609721 474 ntBASIC6.59□□□□□ -1.35
CTR9Q6PD62 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.59□□□□□ -1.35
CTR9Q6PD62 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CTR9Q6PD62 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms