Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 SETP3-201ENST00000581726 813 ntBASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 BNIP3P38-201ENST00000601117 544 ntBASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 ABI1P1-201ENST00000603375 1120 ntBASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 AC013244.3-201ENST00000605614 388 ntBASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 AC108865.2-201ENST00000606881 432 ntBASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 AF129408.1-201ENST00000608767 431 ntBASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 AC129778.1-202ENST00000623812 261 ntBASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 AC005618.4-201ENST00000625053 554 ntBASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 AC092451.3-201ENST00000625067 1343 ntBASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 AC129915.3-201ENST00000634128 948 ntBASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 AL591379.1-207ENST00000635982 261 ntBASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 SAMMSON-210ENST00000641260 1308 ntBASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ZNF549Q6P9A3 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 AC018809.2-201ENST00000602436 3823 ntBASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 GAPDHP24-201ENST00000328713 983 ntBASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 RPS6P23-201ENST00000413224 722 ntBASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 AL158827.1-201ENST00000416300 391 ntBASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 AC092447.3-201ENST00000426027 686 ntBASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 AC127526.2-201ENST00000426436 775 ntBASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 AC115283.1-201ENST00000427353 400 ntBASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 HMGB3P24-201ENST00000433260 622 ntBASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 AC092106.1-201ENST00000444291 373 ntBASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 ZNF736P8Y-201ENST00000451913 669 ntBASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 SNORD125-201ENST00000459538 96 ntBASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 HMGN1P8-201ENST00000463578 288 ntBASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 SEPT7P6-201ENST00000469999 1143 ntBASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 GTF2IP9-201ENST00000502460 301 ntBASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 NENFP3-201ENST00000503735 313 ntBASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 GLUD1P3-202ENST00000508551 200 ntBASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 AC090568.1-201ENST00000509499 856 ntBASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 AC016550.3-201ENST00000515706 767 ntBASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 RN7SKP70-201ENST00000516655 271 ntBASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 MTND1P24-201ENST00000552175 861 ntBASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 AC012414.2-201ENST00000559474 187 ntBASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 AC092121.1-201ENST00000569452 202 ntBASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 AC015802.2-201ENST00000589690 189 ntBASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 AC133794.1-201ENST00000602731 914 ntBASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 OR4H6P-202ENST00000603819 340 ntBASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 CR589904.2-201ENST00000612533 440 ntBASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 AC090607.5-201ENST00000615692 224 ntBASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 MIR6071-201ENST00000616741 78 ntBASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 AP005431.1-201ENST00000618479 319 ntBASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 AC010608.3-201ENST00000625048 527 ntBASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 MRE11P1-201ENST00000464884 2127 ntBASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
ZNF549Q6P9A3 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 AL592429.1-201ENST00000403909 1473 ntBASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 NEPNP-201ENST00000404786 1371 ntBASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 179.9 ms