Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.07□□□□□ -1.44
SNX30Q5VWJ9 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
SNX30Q5VWJ9 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.07□□□□□ -1.44
SNX30Q5VWJ9 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.07□□□□□ -1.44
SNX30Q5VWJ9 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.07□□□□□ -1.44
SNX30Q5VWJ9 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.07□□□□□ -1.44
SNX30Q5VWJ9 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
SNX30Q5VWJ9 AC073111.2-201ENST00000605657 1075 ntBASIC6.07□□□□□ -1.44
SNX30Q5VWJ9 AL159169.2-201ENST00000610061 1269 ntBASIC6.07□□□□□ -1.44
SNX30Q5VWJ9 MIR6729-201ENST00000618194 65 ntBASIC6.07□□□□□ -1.44
SNX30Q5VWJ9 AL158062.1-201ENST00000619632 745 ntBASIC6.07□□□□□ -1.44
SNX30Q5VWJ9 AL162233.1-201ENST00000620014 944 ntBASIC6.07□□□□□ -1.44
SNX30Q5VWJ9 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.07□□□□□ -1.44
SNX30Q5VWJ9 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.07□□□□□ -1.44
SNX30Q5VWJ9 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.07□□□□□ -1.44
SNX30Q5VWJ9 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SNX30Q5VWJ9 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SNX30Q5VWJ9 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
SNX30Q5VWJ9 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SNX30Q5VWJ9 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.07□□□□□ -1.44
SNX30Q5VWJ9 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SNX30Q5VWJ9 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.07□□□□□ -1.44
SNX30Q5VWJ9 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
SNX30Q5VWJ9 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SNX30Q5VWJ9 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.07□□□□□ -1.44
SNX30Q5VWJ9 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
SNX30Q5VWJ9 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SNX30Q5VWJ9 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SNX30Q5VWJ9 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 AP005435.3-201ENST00000531260 3198 ntBASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 AP000473.2-201ENST00000602659 1537 ntBASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 AC010132.2-201ENST00000295493 1043 ntBASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 SNORD65-201ENST00000391079 73 ntBASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 HMGB3P24-201ENST00000433260 622 ntBASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 AC096775.1-201ENST00000437724 448 ntBASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 AC015983.1-201ENST00000441577 373 ntBASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 RPL36AP39-201ENST00000445859 318 ntBASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 CCRL1P1-201ENST00000449542 1053 ntBASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 HGF-207ENST00000453018 721 ntTSL 3 BASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 RPS3AP15-201ENST00000483874 781 ntBASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 AC009120.1-201ENST00000493458 473 ntBASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 AC074255.1-201ENST00000511259 501 ntBASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 RNU6-491P-201ENST00000516099 110 ntBASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 AC027544.3-201ENST00000535082 757 ntBASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 AL121594.2-201ENST00000541658 472 ntBASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 IGBP1P1-201ENST00000554337 1009 ntBASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 AL133370.2-201ENST00000619934 439 ntBASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 AC015722.2-201ENST00000622210 551 ntBASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 AC091948.2-201ENST00000636510 279 ntBASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.06□□□□□ -1.44
SNX30Q5VWJ9 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
SNX30Q5VWJ9 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SNX30Q5VWJ9 AC117409.1-201ENST00000470499 1310 ntBASIC6.05□□□□□ -1.44
SNX30Q5VWJ9 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.05□□□□□ -1.44
SNX30Q5VWJ9 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SNX30Q5VWJ9 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SNX30Q5VWJ9 AL121839.2-201ENST00000565058 6943 ntBASIC6.05□□□□□ -1.44
SNX30Q5VWJ9 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
SNX30Q5VWJ9 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms