Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 NDUFA5P12-201ENST00000503796 343 ntBASIC6.57□□□□□ -1.36
RFX7Q2KHR2 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.57□□□□□ -1.36
RFX7Q2KHR2 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.57□□□□□ -1.36
RFX7Q2KHR2 OR5M14P-201ENST00000506803 618 ntBASIC6.57□□□□□ -1.36
RFX7Q2KHR2 AC109464.1-201ENST00000511091 819 ntBASIC6.57□□□□□ -1.36
RFX7Q2KHR2 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.57□□□□□ -1.36
RFX7Q2KHR2 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.57□□□□□ -1.36
RFX7Q2KHR2 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.57□□□□□ -1.36
RFX7Q2KHR2 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RFX7Q2KHR2 AC024940.4-201ENST00000605507 246 ntBASIC6.57□□□□□ -1.36
RFX7Q2KHR2 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC6.57□□□□□ -1.36
RFX7Q2KHR2 AC109583.2-201ENST00000617367 129 ntBASIC6.57□□□□□ -1.36
RFX7Q2KHR2 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
RFX7Q2KHR2 CASC19-222ENST00000641321 1173 ntBASIC6.57□□□□□ -1.36
RFX7Q2KHR2 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
RFX7Q2KHR2 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RFX7Q2KHR2 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
RFX7Q2KHR2 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.57□□□□□ -1.36
RFX7Q2KHR2 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RFX7Q2KHR2 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RFX7Q2KHR2 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
RFX7Q2KHR2 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RFX7Q2KHR2 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RFX7Q2KHR2 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.57□□□□□ -1.36
RFX7Q2KHR2 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RFX7Q2KHR2 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RFX7Q2KHR2 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RFX7Q2KHR2 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.57□□□□□ -1.36
RFX7Q2KHR2 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
RFX7Q2KHR2 AC018765.1-201ENST00000623357 3446 ntBASIC6.57□□□□□ -1.36
RFX7Q2KHR2 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.57□□□□□ -1.36
RFX7Q2KHR2 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RFX7Q2KHR2 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RFX7Q2KHR2 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.57□□□□□ -1.36
RFX7Q2KHR2 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
RFX7Q2KHR2 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
RFX7Q2KHR2 RNA5SP487-201ENST00000410186 122 ntBASIC6.57□□□□□ -1.36
RFX7Q2KHR2 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.57□□□□□ -1.36
RFX7Q2KHR2 AL133325.1-201ENST00000421090 382 ntBASIC6.57□□□□□ -1.36
RFX7Q2KHR2 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.57□□□□□ -1.36
RFX7Q2KHR2 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.57□□□□□ -1.36
RFX7Q2KHR2 AL359265.1-201ENST00000440296 795 ntBASIC6.57□□□□□ -1.36
RFX7Q2KHR2 GAPDHP25-201ENST00000447061 1001 ntBASIC6.57□□□□□ -1.36
RFX7Q2KHR2 AC128716.1-201ENST00000475129 166 ntBASIC6.57□□□□□ -1.36
RFX7Q2KHR2 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6.57□□□□□ -1.36
RFX7Q2KHR2 AC097486.1-201ENST00000515331 210 ntBASIC6.57□□□□□ -1.36
RFX7Q2KHR2 OR4A43P-201ENST00000532938 908 ntBASIC6.57□□□□□ -1.36
RFX7Q2KHR2 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.57□□□□□ -1.36
RFX7Q2KHR2 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.57□□□□□ -1.36
RFX7Q2KHR2 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.57□□□□□ -1.36
RFX7Q2KHR2 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.57□□□□□ -1.36
RFX7Q2KHR2 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.57□□□□□ -1.36
RFX7Q2KHR2 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RFX7Q2KHR2 AC108738.1-201ENST00000603703 237 ntBASIC6.57□□□□□ -1.36
RFX7Q2KHR2 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.57□□□□□ -1.36
RFX7Q2KHR2 RPSAP73-201ENST00000614820 330 ntBASIC6.57□□□□□ -1.36
RFX7Q2KHR2 SAMMSON-209ENST00000641222 1100 ntBASIC6.57□□□□□ -1.36
RFX7Q2KHR2 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
RFX7Q2KHR2 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.56□□□□□ -1.36
RFX7Q2KHR2 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
RFX7Q2KHR2 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.56□□□□□ -1.36
RFX7Q2KHR2 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.56□□□□□ -1.36
RFX7Q2KHR2 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
RFX7Q2KHR2 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.56□□□□□ -1.36
RFX7Q2KHR2 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RFX7Q2KHR2 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.56□□□□□ -1.36
RFX7Q2KHR2 CR383656.5-201ENST00000547616 1340 ntBASIC6.56□□□□□ -1.36
RFX7Q2KHR2 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
RFX7Q2KHR2 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.56□□□□□ -1.36
RFX7Q2KHR2 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
RFX7Q2KHR2 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RFX7Q2KHR2 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
RFX7Q2KHR2 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RFX7Q2KHR2 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.56□□□□□ -1.36
RFX7Q2KHR2 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.56□□□□□ -1.36
RFX7Q2KHR2 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.56□□□□□ -1.36
RFX7Q2KHR2 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.56□□□□□ -1.36
RFX7Q2KHR2 RPL7P39-201ENST00000481157 744 ntBASIC6.56□□□□□ -1.36
RFX7Q2KHR2 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.56□□□□□ -1.36
RFX7Q2KHR2 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.56□□□□□ -1.36
RFX7Q2KHR2 RNU6-941P-201ENST00000516346 108 ntBASIC6.56□□□□□ -1.36
RFX7Q2KHR2 HMGN2P6-201ENST00000551091 273 ntBASIC6.56□□□□□ -1.36
RFX7Q2KHR2 AC004825.1-201ENST00000555068 586 ntBASIC6.56□□□□□ -1.36
RFX7Q2KHR2 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC6.56□□□□□ -1.36
RFX7Q2KHR2 AC244107.2-201ENST00000611773 76 ntBASIC6.56□□□□□ -1.36
RFX7Q2KHR2 AC037198.3-201ENST00000616754 526 ntBASIC6.56□□□□□ -1.36
RFX7Q2KHR2 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.56□□□□□ -1.36
RFX7Q2KHR2 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
RFX7Q2KHR2 AC073869.8-201ENST00000641806 335 ntBASIC6.56□□□□□ -1.36
RFX7Q2KHR2 AL137141.1-201ENST00000624622 4836 ntBASIC6.55□□□□□ -1.36
RFX7Q2KHR2 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC6.55□□□□□ -1.36
RFX7Q2KHR2 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.55□□□□□ -1.36
RFX7Q2KHR2 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
RFX7Q2KHR2 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
RFX7Q2KHR2 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
RFX7Q2KHR2 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RFX7Q2KHR2 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
RFX7Q2KHR2 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RFX7Q2KHR2 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
RFX7Q2KHR2 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms