Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.17□□□□□ -1.58
SCN1BQ07699 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.17□□□□□ -1.58
SCN1BQ07699 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.17□□□□□ -1.58
SCN1BQ07699 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.17□□□□□ -1.58
SCN1BQ07699 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.17□□□□□ -1.58
SCN1BQ07699 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.17□□□□□ -1.58
SCN1BQ07699 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.17□□□□□ -1.58
SCN1BQ07699 CCDC58P1-201ENST00000578567 430 ntBASIC5.17□□□□□ -1.58
SCN1BQ07699 MTCO3P22-201ENST00000603219 784 ntBASIC5.17□□□□□ -1.58
SCN1BQ07699 AC011891.2-201ENST00000604949 397 ntBASIC5.17□□□□□ -1.58
SCN1BQ07699 AC008555.7-201ENST00000605008 583 ntBASIC5.17□□□□□ -1.58
SCN1BQ07699 RPSAP75-201ENST00000605848 301 ntBASIC5.17□□□□□ -1.58
SCN1BQ07699 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.17□□□□□ -1.58
SCN1BQ07699 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.17□□□□□ -1.58
SCN1BQ07699 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.17□□□□□ -1.58
SCN1BQ07699 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SCN1BQ07699 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.17□□□□□ -1.58
SCN1BQ07699 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.17□□□□□ -1.58
SCN1BQ07699 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.17□□□□□ -1.58
SCN1BQ07699 AC006484.1-201ENST00000435086 1884 ntBASIC5.17□□□□□ -1.58
SCN1BQ07699 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
SCN1BQ07699 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SCN1BQ07699 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SCN1BQ07699 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SCN1BQ07699 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SCN1BQ07699 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.16□□□□□ -1.58
SCN1BQ07699 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SCN1BQ07699 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
SCN1BQ07699 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SCN1BQ07699 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
SCN1BQ07699 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SCN1BQ07699 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SCN1BQ07699 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SCN1BQ07699 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SCN1BQ07699 AL589826.1-201ENST00000340697 249 ntBASIC5.16□□□□□ -1.58
SCN1BQ07699 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SCN1BQ07699 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SCN1BQ07699 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SCN1BQ07699 RNA5SP156-201ENST00000410250 110 ntBASIC5.16□□□□□ -1.58
SCN1BQ07699 HYALP1-201ENST00000417674 1279 ntBASIC5.16□□□□□ -1.58
SCN1BQ07699 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.16□□□□□ -1.58
SCN1BQ07699 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.16□□□□□ -1.58
SCN1BQ07699 VN1R20P-201ENST00000425215 966 ntBASIC5.16□□□□□ -1.58
SCN1BQ07699 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.16□□□□□ -1.58
SCN1BQ07699 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SCN1BQ07699 MTND4LP7-201ENST00000431728 294 ntBASIC5.16□□□□□ -1.58
SCN1BQ07699 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SCN1BQ07699 AC094019.1-201ENST00000434678 472 ntBASIC5.16□□□□□ -1.58
SCN1BQ07699 AL022324.2-201ENST00000434827 780 ntBASIC5.16□□□□□ -1.58
SCN1BQ07699 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SCN1BQ07699 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.16□□□□□ -1.58
SCN1BQ07699 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.16□□□□□ -1.58
SCN1BQ07699 RPL7AP52-201ENST00000458096 790 ntBASIC5.16□□□□□ -1.58
SCN1BQ07699 RPL34P33-201ENST00000486062 334 ntBASIC5.16□□□□□ -1.58
SCN1BQ07699 AC069304.1-201ENST00000491593 704 ntBASIC5.16□□□□□ -1.58
SCN1BQ07699 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.16□□□□□ -1.58
SCN1BQ07699 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.16□□□□□ -1.58
SCN1BQ07699 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.16□□□□□ -1.58
SCN1BQ07699 AC138517.1-201ENST00000515724 568 ntBASIC5.16□□□□□ -1.58
SCN1BQ07699 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.16□□□□□ -1.58
SCN1BQ07699 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.16□□□□□ -1.58
SCN1BQ07699 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.16□□□□□ -1.58
SCN1BQ07699 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.16□□□□□ -1.58
SCN1BQ07699 AC005632.2-201ENST00000564271 828 ntBASIC5.16□□□□□ -1.58
SCN1BQ07699 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.16□□□□□ -1.58
SCN1BQ07699 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SCN1BQ07699 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.16□□□□□ -1.58
SCN1BQ07699 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.16□□□□□ -1.58
SCN1BQ07699 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.16□□□□□ -1.58
SCN1BQ07699 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.16□□□□□ -1.58
SCN1BQ07699 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SCN1BQ07699 AC096553.1-201ENST00000605169 829 ntBASIC5.16□□□□□ -1.58
SCN1BQ07699 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.16□□□□□ -1.58
SCN1BQ07699 AC141002.1-201ENST00000607025 279 ntBASIC5.16□□□□□ -1.58
SCN1BQ07699 AL122125.1-201ENST00000616999 600 ntBASIC5.16□□□□□ -1.58
SCN1BQ07699 WBP1LP8-201ENST00000617401 327 ntBASIC5.16□□□□□ -1.58
SCN1BQ07699 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.16□□□□□ -1.58
SCN1BQ07699 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SCN1BQ07699 AC021766.1-201ENST00000624404 741 ntBASIC5.16□□□□□ -1.58
SCN1BQ07699 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.16□□□□□ -1.58
SCN1BQ07699 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.16□□□□□ -1.58
SCN1BQ07699 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
SCN1BQ07699 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
SCN1BQ07699 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
SCN1BQ07699 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SCN1BQ07699 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SCN1BQ07699 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
SCN1BQ07699 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.16□□□□□ -1.58
SCN1BQ07699 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
SCN1BQ07699 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
SCN1BQ07699 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.16□□□□□ -1.58
SCN1BQ07699 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.58
SCN1BQ07699 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
SCN1BQ07699 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.15□□□□□ -1.58
SCN1BQ07699 Z95331.1-201ENST00000623075 23112 ntBASIC5.15□□□□□ -1.58
SCN1BQ07699 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.15□□□□□ -1.58
SCN1BQ07699 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SCN1BQ07699 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SCN1BQ07699 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SCN1BQ07699 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 156.3 ms