Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC4.26□□□□□ -1.73
HIST1H1AQ02539 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC4.26□□□□□ -1.73
HIST1H1AQ02539 AC020779.1-201ENST00000478757 796 ntBASIC4.26□□□□□ -1.73
HIST1H1AQ02539 RN7SL193P-201ENST00000491708 276 ntBASIC4.26□□□□□ -1.73
HIST1H1AQ02539 AL049874.2-201ENST00000492636 288 ntBASIC4.26□□□□□ -1.73
HIST1H1AQ02539 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC4.26□□□□□ -1.73
HIST1H1AQ02539 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC4.26□□□□□ -1.73
HIST1H1AQ02539 RN7SKP183-201ENST00000517169 324 ntBASIC4.26□□□□□ -1.73
HIST1H1AQ02539 AC139365.2-201ENST00000517972 253 ntBASIC4.26□□□□□ -1.73
HIST1H1AQ02539 AC011853.1-201ENST00000518911 454 ntBASIC4.26□□□□□ -1.73
HIST1H1AQ02539 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC4.26□□□□□ -1.73
HIST1H1AQ02539 IGLV3-30-201ENST00000524362 298 ntBASIC4.26□□□□□ -1.73
HIST1H1AQ02539 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC4.26□□□□□ -1.73
HIST1H1AQ02539 AC139697.1-201ENST00000548429 745 ntBASIC4.26□□□□□ -1.73
HIST1H1AQ02539 AC079905.1-201ENST00000549280 475 ntBASIC4.26□□□□□ -1.73
HIST1H1AQ02539 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.26□□□□□ -1.73
HIST1H1AQ02539 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.26□□□□□ -1.73
HIST1H1AQ02539 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC4.26□□□□□ -1.73
HIST1H1AQ02539 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HIST1H1AQ02539 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.26□□□□□ -1.73
HIST1H1AQ02539 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HIST1H1AQ02539 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
HIST1H1AQ02539 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HIST1H1AQ02539 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HIST1H1AQ02539 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
HIST1H1AQ02539 CASC19-221ENST00000641309 1382 ntBASIC4.26□□□□□ -1.73
HIST1H1AQ02539 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HIST1H1AQ02539 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.25□□□□□ -1.73
HIST1H1AQ02539 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.25□□□□□ -1.73
HIST1H1AQ02539 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.25□□□□□ -1.73
HIST1H1AQ02539 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.25□□□□□ -1.73
HIST1H1AQ02539 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HIST1H1AQ02539 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
HIST1H1AQ02539 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HIST1H1AQ02539 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HIST1H1AQ02539 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HIST1H1AQ02539 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.25□□□□□ -1.73
HIST1H1AQ02539 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.25□□□□□ -1.73
HIST1H1AQ02539 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.25□□□□□ -1.73
HIST1H1AQ02539 SNORA79B-201ENST00000410557 148 ntBASIC4.25□□□□□ -1.73
HIST1H1AQ02539 RN7SKP247-201ENST00000411094 308 ntBASIC4.25□□□□□ -1.73
HIST1H1AQ02539 RPS6P23-201ENST00000413224 722 ntBASIC4.25□□□□□ -1.73
HIST1H1AQ02539 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HIST1H1AQ02539 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.25□□□□□ -1.73
HIST1H1AQ02539 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.25□□□□□ -1.73
HIST1H1AQ02539 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.25□□□□□ -1.73
HIST1H1AQ02539 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.25□□□□□ -1.73
HIST1H1AQ02539 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.25□□□□□ -1.73
HIST1H1AQ02539 AC092447.2-201ENST00000435487 669 ntBASIC4.25□□□□□ -1.73
HIST1H1AQ02539 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.25□□□□□ -1.73
HIST1H1AQ02539 NXT1P1-201ENST00000458481 316 ntBASIC4.25□□□□□ -1.73
HIST1H1AQ02539 RPL32P33-201ENST00000487023 394 ntBASIC4.25□□□□□ -1.73
HIST1H1AQ02539 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC4.25□□□□□ -1.73
HIST1H1AQ02539 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC4.25□□□□□ -1.73
HIST1H1AQ02539 SCARNA6.1-201ENST00000516989 238 ntBASIC4.25□□□□□ -1.73
HIST1H1AQ02539 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC4.25□□□□□ -1.73
HIST1H1AQ02539 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.25□□□□□ -1.73
HIST1H1AQ02539 HMGN2P36-201ENST00000529541 409 ntBASIC4.25□□□□□ -1.73
HIST1H1AQ02539 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC4.25□□□□□ -1.73
HIST1H1AQ02539 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.25□□□□□ -1.73
HIST1H1AQ02539 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC4.25□□□□□ -1.73
HIST1H1AQ02539 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.25□□□□□ -1.73
HIST1H1AQ02539 AGGF1P7-201ENST00000562369 913 ntBASIC4.25□□□□□ -1.73
HIST1H1AQ02539 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HIST1H1AQ02539 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC4.25□□□□□ -1.73
HIST1H1AQ02539 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC4.25□□□□□ -1.73
HIST1H1AQ02539 OR8G7P-201ENST00000616658 848 ntBASIC4.25□□□□□ -1.73
HIST1H1AQ02539 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HIST1H1AQ02539 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC4.25□□□□□ -1.73
HIST1H1AQ02539 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC4.25□□□□□ -1.73
HIST1H1AQ02539 OR55B1P-203ENST00000641518 2602 ntBASIC4.25□□□□□ -1.73
HIST1H1AQ02539 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HIST1H1AQ02539 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HIST1H1AQ02539 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
HIST1H1AQ02539 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HIST1H1AQ02539 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.25□□□□□ -1.73
HIST1H1AQ02539 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
HIST1H1AQ02539 EEF1A1P21-201ENST00000512363 1344 ntBASIC4.24□□□□□ -1.73
HIST1H1AQ02539 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HIST1H1AQ02539 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HIST1H1AQ02539 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.24□□□□□ -1.73
HIST1H1AQ02539 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC4.24□□□□□ -1.73
HIST1H1AQ02539 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
HIST1H1AQ02539 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HIST1H1AQ02539 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
HIST1H1AQ02539 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HIST1H1AQ02539 TMSB4XP2-201ENST00000335179 210 ntBASIC4.24□□□□□ -1.73
HIST1H1AQ02539 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.24□□□□□ -1.73
HIST1H1AQ02539 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HIST1H1AQ02539 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
HIST1H1AQ02539 AC234781.4-201ENST00000419384 244 ntBASIC4.24□□□□□ -1.73
HIST1H1AQ02539 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC4.24□□□□□ -1.73
HIST1H1AQ02539 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC4.24□□□□□ -1.73
HIST1H1AQ02539 MTND6P12-201ENST00000428247 522 ntBASIC4.24□□□□□ -1.73
HIST1H1AQ02539 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC4.24□□□□□ -1.73
HIST1H1AQ02539 AC007679.3-201ENST00000434035 414 ntBASIC4.24□□□□□ -1.73
HIST1H1AQ02539 VN1R110P-201ENST00000438988 971 ntBASIC4.24□□□□□ -1.73
HIST1H1AQ02539 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.24□□□□□ -1.73
HIST1H1AQ02539 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.24□□□□□ -1.73
HIST1H1AQ02539 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms