Protein–RNA interactions for Protein: Q01804

OTUD4, OTU domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4Q01804 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.71□□□□□ -1.5
OTUD4Q01804 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
OTUD4Q01804 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
OTUD4Q01804 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
OTUD4Q01804 AP000473.2-201ENST00000602659 1537 ntBASIC5.7□□□□□ -1.5
OTUD4Q01804 AC100757.1-201ENST00000616872 1835 ntBASIC5.7□□□□□ -1.5
OTUD4Q01804 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
OTUD4Q01804 OR52B3P-201ENST00000314715 928 ntBASIC5.7□□□□□ -1.5
OTUD4Q01804 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.7□□□□□ -1.5
OTUD4Q01804 PPIAP9-201ENST00000403866 498 ntBASIC5.7□□□□□ -1.5
OTUD4Q01804 RPS3AP2-201ENST00000407190 754 ntBASIC5.7□□□□□ -1.5
OTUD4Q01804 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.7□□□□□ -1.5
OTUD4Q01804 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.7□□□□□ -1.5
OTUD4Q01804 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.7□□□□□ -1.5
OTUD4Q01804 RPL31P15-201ENST00000449770 338 ntBASIC5.7□□□□□ -1.5
OTUD4Q01804 RN7SL174P-201ENST00000475578 289 ntBASIC5.7□□□□□ -1.5
OTUD4Q01804 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.7□□□□□ -1.5
OTUD4Q01804 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.7□□□□□ -1.5
OTUD4Q01804 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.7□□□□□ -1.5
OTUD4Q01804 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.7□□□□□ -1.5
OTUD4Q01804 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.7□□□□□ -1.5
OTUD4Q01804 AC022826.1-201ENST00000519383 805 ntBASIC5.7□□□□□ -1.5
OTUD4Q01804 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.7□□□□□ -1.5
OTUD4Q01804 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.7□□□□□ -1.5
OTUD4Q01804 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.7□□□□□ -1.5
OTUD4Q01804 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.7□□□□□ -1.5
OTUD4Q01804 AC027243.2-201ENST00000602530 724 ntBASIC5.7□□□□□ -1.5
OTUD4Q01804 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.7□□□□□ -1.5
OTUD4Q01804 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
OTUD4Q01804 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.7□□□□□ -1.5
OTUD4Q01804 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
OTUD4Q01804 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
OTUD4Q01804 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
OTUD4Q01804 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.7□□□□□ -1.5
OTUD4Q01804 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
OTUD4Q01804 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
OTUD4Q01804 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
OTUD4Q01804 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
OTUD4Q01804 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.69□□□□□ -1.5
OTUD4Q01804 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.69□□□□□ -1.5
OTUD4Q01804 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
OTUD4Q01804 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.69□□□□□ -1.5
OTUD4Q01804 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
OTUD4Q01804 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
OTUD4Q01804 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
OTUD4Q01804 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
OTUD4Q01804 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
OTUD4Q01804 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
OTUD4Q01804 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
OTUD4Q01804 AC106872.5-201ENST00000508856 1416 ntBASIC5.69□□□□□ -1.5
OTUD4Q01804 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
OTUD4Q01804 RNA5SP284-201ENST00000384547 118 ntBASIC5.69□□□□□ -1.5
OTUD4Q01804 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
OTUD4Q01804 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.69□□□□□ -1.5
OTUD4Q01804 AC113412.1-201ENST00000425840 504 ntBASIC5.69□□□□□ -1.5
OTUD4Q01804 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.69□□□□□ -1.5
OTUD4Q01804 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.69□□□□□ -1.5
OTUD4Q01804 AC013410.1-201ENST00000436223 1232 ntBASIC5.69□□□□□ -1.5
OTUD4Q01804 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.69□□□□□ -1.5
OTUD4Q01804 SEPT7P3-201ENST00000455017 621 ntBASIC5.69□□□□□ -1.5
OTUD4Q01804 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
OTUD4Q01804 AC007998.1-201ENST00000474156 672 ntBASIC5.69□□□□□ -1.5
OTUD4Q01804 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.69□□□□□ -1.5
OTUD4Q01804 AC091544.1-201ENST00000484702 348 ntBASIC5.69□□□□□ -1.5
OTUD4Q01804 AC138409.2-202ENST00000507274 458 ntBASIC5.69□□□□□ -1.5
OTUD4Q01804 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC5.69□□□□□ -1.5
OTUD4Q01804 OR4A43P-201ENST00000532938 908 ntBASIC5.69□□□□□ -1.5
OTUD4Q01804 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.69□□□□□ -1.5
OTUD4Q01804 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
OTUD4Q01804 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.69□□□□□ -1.5
OTUD4Q01804 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.69□□□□□ -1.5
OTUD4Q01804 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.69□□□□□ -1.5
OTUD4Q01804 MIR7853-201ENST00000584820 132 ntBASIC5.69□□□□□ -1.5
OTUD4Q01804 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.69□□□□□ -1.5
OTUD4Q01804 AC109309.2-201ENST00000612597 332 ntBASIC5.69□□□□□ -1.5
OTUD4Q01804 MIR6886-201ENST00000619864 61 ntBASIC5.69□□□□□ -1.5
OTUD4Q01804 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.69□□□□□ -1.5
OTUD4Q01804 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
OTUD4Q01804 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
OTUD4Q01804 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
OTUD4Q01804 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
OTUD4Q01804 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.69□□□□□ -1.5
OTUD4Q01804 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
OTUD4Q01804 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
OTUD4Q01804 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
OTUD4Q01804 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
OTUD4Q01804 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
OTUD4Q01804 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
OTUD4Q01804 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
OTUD4Q01804 MRRFP1-201ENST00000435941 1675 ntBASIC5.69□□□□□ -1.5
OTUD4Q01804 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
OTUD4Q01804 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.69□□□□□ -1.5
OTUD4Q01804 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.68□□□□□ -1.5
OTUD4Q01804 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
OTUD4Q01804 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.68□□□□□ -1.5
OTUD4Q01804 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
OTUD4Q01804 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
OTUD4Q01804 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
OTUD4Q01804 RN7SKP229-201ENST00000410465 302 ntBASIC5.68□□□□□ -1.5
OTUD4Q01804 SMC4P1-201ENST00000414479 527 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms