Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AL663074.2-201ENST00000440621 479 ntBASIC5.31□□□□□ -1.56
CLDN20P56880 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.31□□□□□ -1.56
CLDN20P56880 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.31□□□□□ -1.56
CLDN20P56880 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.31□□□□□ -1.56
CLDN20P56880 RPS26P24-201ENST00000497656 331 ntBASIC5.31□□□□□ -1.56
CLDN20P56880 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.31□□□□□ -1.56
CLDN20P56880 FABP5P6-201ENST00000510588 409 ntBASIC5.31□□□□□ -1.56
CLDN20P56880 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.31□□□□□ -1.56
CLDN20P56880 AC138832.1-201ENST00000522871 556 ntBASIC5.31□□□□□ -1.56
CLDN20P56880 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.31□□□□□ -1.56
CLDN20P56880 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.31□□□□□ -1.56
CLDN20P56880 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.31□□□□□ -1.56
CLDN20P56880 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.31□□□□□ -1.56
CLDN20P56880 AP001496.3-201ENST00000580230 913 ntBASIC5.31□□□□□ -1.56
CLDN20P56880 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC5.31□□□□□ -1.56
CLDN20P56880 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.31□□□□□ -1.56
CLDN20P56880 QTRT1P1-201ENST00000604344 1078 ntBASIC5.31□□□□□ -1.56
CLDN20P56880 RPL12P48-201ENST00000605620 304 ntBASIC5.31□□□□□ -1.56
CLDN20P56880 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.31□□□□□ -1.56
CLDN20P56880 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.31□□□□□ -1.56
CLDN20P56880 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.31□□□□□ -1.56
CLDN20P56880 AC005618.4-201ENST00000625053 554 ntBASIC5.31□□□□□ -1.56
CLDN20P56880 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.31□□□□□ -1.56
CLDN20P56880 OR11H2-202ENST00000641517 1085 ntBASIC5.31□□□□□ -1.56
CLDN20P56880 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN20P56880 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN20P56880 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN20P56880 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CLDN20P56880 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN20P56880 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN20P56880 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN20P56880 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.31□□□□□ -1.56
CLDN20P56880 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN20P56880 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN20P56880 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN20P56880 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CLDN20P56880 TCP11X1-202ENST00000622971 1372 ntBASIC5.3□□□□□ -1.56
CLDN20P56880 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.3□□□□□ -1.56
CLDN20P56880 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
CLDN20P56880 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN20P56880 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.3□□□□□ -1.56
CLDN20P56880 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
CLDN20P56880 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN20P56880 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN20P56880 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN20P56880 AP001029.2-203ENST00000589795 4910 ntBASIC5.3□□□□□ -1.56
CLDN20P56880 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
CLDN20P56880 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CLDN20P56880 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.3□□□□□ -1.56
CLDN20P56880 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN20P56880 OR52B3P-201ENST00000314715 928 ntBASIC5.3□□□□□ -1.56
CLDN20P56880 RNA5SP500-201ENST00000364486 119 ntBASIC5.3□□□□□ -1.56
CLDN20P56880 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN20P56880 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CLDN20P56880 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
CLDN20P56880 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.3□□□□□ -1.56
CLDN20P56880 CBX1P3-201ENST00000413296 527 ntBASIC5.3□□□□□ -1.56
CLDN20P56880 AC079809.1-201ENST00000415468 276 ntBASIC5.3□□□□□ -1.56
CLDN20P56880 AC019205.1-201ENST00000421830 730 ntBASIC5.3□□□□□ -1.56
CLDN20P56880 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.3□□□□□ -1.56
CLDN20P56880 HMGN2P27-201ENST00000427352 270 ntBASIC5.3□□□□□ -1.56
CLDN20P56880 AC126120.1-201ENST00000431082 470 ntBASIC5.3□□□□□ -1.56
CLDN20P56880 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.3□□□□□ -1.56
CLDN20P56880 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.3□□□□□ -1.56
CLDN20P56880 SCAND3P1-201ENST00000439854 1060 ntBASIC5.3□□□□□ -1.56
CLDN20P56880 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.3□□□□□ -1.56
CLDN20P56880 AC073109.1-201ENST00000445066 978 ntBASIC5.3□□□□□ -1.56
CLDN20P56880 BUD31P2-201ENST00000449374 300 ntBASIC5.3□□□□□ -1.56
CLDN20P56880 AP006222.1-205ENST00000450734 457 ntBASIC5.3□□□□□ -1.56
CLDN20P56880 AC093166.4-201ENST00000457867 318 ntBASIC5.3□□□□□ -1.56
CLDN20P56880 AC011476.1-201ENST00000466725 307 ntBASIC5.3□□□□□ -1.56
CLDN20P56880 AC104629.2-201ENST00000468627 598 ntBASIC5.3□□□□□ -1.56
CLDN20P56880 PFN1P6-201ENST00000476786 399 ntBASIC5.3□□□□□ -1.56
CLDN20P56880 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.3□□□□□ -1.56
CLDN20P56880 NPM1P21-201ENST00000513394 762 ntBASIC5.3□□□□□ -1.56
CLDN20P56880 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.3□□□□□ -1.56
CLDN20P56880 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.3□□□□□ -1.56
CLDN20P56880 IGLV3-30-201ENST00000524362 298 ntBASIC5.3□□□□□ -1.56
CLDN20P56880 AP000648.1-201ENST00000529682 397 ntBASIC5.3□□□□□ -1.56
CLDN20P56880 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.3□□□□□ -1.56
CLDN20P56880 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.3□□□□□ -1.56
CLDN20P56880 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.3□□□□□ -1.56
CLDN20P56880 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.3□□□□□ -1.56
CLDN20P56880 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC5.3□□□□□ -1.56
CLDN20P56880 FAM27E4-201ENST00000605259 342 ntBASIC5.3□□□□□ -1.56
CLDN20P56880 BNIP3P19-201ENST00000605397 577 ntBASIC5.3□□□□□ -1.56
CLDN20P56880 AL031601.1-201ENST00000605702 394 ntBASIC5.3□□□□□ -1.56
CLDN20P56880 AC012213.4-201ENST00000606457 354 ntBASIC5.3□□□□□ -1.56
CLDN20P56880 AC024933.1-201ENST00000608472 348 ntBASIC5.3□□□□□ -1.56
CLDN20P56880 AC079298.2-201ENST00000623885 459 ntBASIC5.3□□□□□ -1.56
CLDN20P56880 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN20P56880 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.3□□□□□ -1.56
CLDN20P56880 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN20P56880 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.3□□□□□ -1.56
CLDN20P56880 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
CLDN20P56880 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN20P56880 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN20P56880 AC110792.3-201ENST00000595906 1614 ntBASIC5.3□□□□□ -1.56
CLDN20P56880 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.3□□□□□ -1.56
CLDN20P56880 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms