Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
PKNOX1P55347 AL450345.1-202ENST00000605741 3881 ntBASIC5.32□□□□□ -1.56
PKNOX1P55347 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PKNOX1P55347 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PKNOX1P55347 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.32□□□□□ -1.56
PKNOX1P55347 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PKNOX1P55347 RNA5SP433-201ENST00000364491 114 ntBASIC5.32□□□□□ -1.56
PKNOX1P55347 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.32□□□□□ -1.56
PKNOX1P55347 HMGB1P20-201ENST00000402555 677 ntBASIC5.32□□□□□ -1.56
PKNOX1P55347 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.32□□□□□ -1.56
PKNOX1P55347 AC066692.1-201ENST00000421721 457 ntBASIC5.32□□□□□ -1.56
PKNOX1P55347 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.32□□□□□ -1.56
PKNOX1P55347 AC005297.1-201ENST00000444765 862 ntBASIC5.32□□□□□ -1.56
PKNOX1P55347 RN7SL72P-201ENST00000460697 269 ntBASIC5.32□□□□□ -1.56
PKNOX1P55347 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.32□□□□□ -1.56
PKNOX1P55347 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.32□□□□□ -1.56
PKNOX1P55347 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.32□□□□□ -1.56
PKNOX1P55347 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.32□□□□□ -1.56
PKNOX1P55347 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.32□□□□□ -1.56
PKNOX1P55347 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.32□□□□□ -1.56
PKNOX1P55347 Vault.2-201ENST00000516519 98 ntBASIC5.32□□□□□ -1.56
PKNOX1P55347 RNA5SP271-201ENST00000516700 88 ntBASIC5.32□□□□□ -1.56
PKNOX1P55347 CDC42P3-201ENST00000518493 633 ntBASIC5.32□□□□□ -1.56
PKNOX1P55347 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.32□□□□□ -1.56
PKNOX1P55347 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.32□□□□□ -1.56
PKNOX1P55347 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.32□□□□□ -1.56
PKNOX1P55347 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.32□□□□□ -1.56
PKNOX1P55347 NMNAT1P5-201ENST00000559657 841 ntBASIC5.32□□□□□ -1.56
PKNOX1P55347 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.32□□□□□ -1.56
PKNOX1P55347 AP001496.3-201ENST00000580230 913 ntBASIC5.32□□□□□ -1.56
PKNOX1P55347 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.32□□□□□ -1.56
PKNOX1P55347 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.32□□□□□ -1.56
PKNOX1P55347 AC073593.1-201ENST00000624500 411 ntBASIC5.32□□□□□ -1.56
PKNOX1P55347 AL596275.2-207ENST00000641188 675 ntBASIC5.32□□□□□ -1.56
PKNOX1P55347 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PKNOX1P55347 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
PKNOX1P55347 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
PKNOX1P55347 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PKNOX1P55347 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PKNOX1P55347 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
PKNOX1P55347 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PKNOX1P55347 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PKNOX1P55347 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PKNOX1P55347 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PKNOX1P55347 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.31□□□□□ -1.56
PKNOX1P55347 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PKNOX1P55347 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PKNOX1P55347 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PKNOX1P55347 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
PKNOX1P55347 RNA5SP394-201ENST00000364216 119 ntBASIC5.31□□□□□ -1.56
PKNOX1P55347 RN7SKP6-201ENST00000364795 319 ntBASIC5.31□□□□□ -1.56
PKNOX1P55347 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.31□□□□□ -1.56
PKNOX1P55347 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PKNOX1P55347 AKR1B10P1-201ENST00000425765 942 ntBASIC5.31□□□□□ -1.56
PKNOX1P55347 HSPD1P12-201ENST00000429127 1069 ntBASIC5.31□□□□□ -1.56
PKNOX1P55347 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PKNOX1P55347 TCEA1P3-201ENST00000443005 880 ntBASIC5.31□□□□□ -1.56
PKNOX1P55347 AL450996.1-201ENST00000445574 1202 ntBASIC5.31□□□□□ -1.56
PKNOX1P55347 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.31□□□□□ -1.56
PKNOX1P55347 AC090804.1-201ENST00000448870 490 ntBASIC5.31□□□□□ -1.56
PKNOX1P55347 GAPDHP14-201ENST00000450472 937 ntBASIC5.31□□□□□ -1.56
PKNOX1P55347 LRRC37A14P-201ENST00000452297 462 ntBASIC5.31□□□□□ -1.56
PKNOX1P55347 AC245028.2-201ENST00000458673 253 ntBASIC5.31□□□□□ -1.56
PKNOX1P55347 AC011476.1-201ENST00000466725 307 ntBASIC5.31□□□□□ -1.56
PKNOX1P55347 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.31□□□□□ -1.56
PKNOX1P55347 RPS24P16-201ENST00000497294 392 ntBASIC5.31□□□□□ -1.56
PKNOX1P55347 IGBP1P4-201ENST00000503202 879 ntBASIC5.31□□□□□ -1.56
PKNOX1P55347 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.31□□□□□ -1.56
PKNOX1P55347 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.31□□□□□ -1.56
PKNOX1P55347 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.31□□□□□ -1.56
PKNOX1P55347 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.31□□□□□ -1.56
PKNOX1P55347 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.31□□□□□ -1.56
PKNOX1P55347 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.31□□□□□ -1.56
PKNOX1P55347 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.31□□□□□ -1.56
PKNOX1P55347 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.31□□□□□ -1.56
PKNOX1P55347 AC106730.2-201ENST00000566641 540 ntBASIC5.31□□□□□ -1.56
PKNOX1P55347 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.31□□□□□ -1.56
PKNOX1P55347 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.31□□□□□ -1.56
PKNOX1P55347 PPATP2-201ENST00000605635 508 ntBASIC5.31□□□□□ -1.56
PKNOX1P55347 AL365181.4-201ENST00000609800 547 ntBASIC5.31□□□□□ -1.56
PKNOX1P55347 AC048341.3-201ENST00000619323 491 ntBASIC5.31□□□□□ -1.56
PKNOX1P55347 AC025262.3-201ENST00000623666 360 ntBASIC5.31□□□□□ -1.56
PKNOX1P55347 AC009950.2-201ENST00000636548 183 ntBASIC5.31□□□□□ -1.56
PKNOX1P55347 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.31□□□□□ -1.56
PKNOX1P55347 SRRM1P3-201ENST00000426911 2678 ntBASIC5.31□□□□□ -1.56
PKNOX1P55347 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PKNOX1P55347 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PKNOX1P55347 AC011755.1-201ENST00000623763 2049 ntBASIC5.31□□□□□ -1.56
PKNOX1P55347 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.31□□□□□ -1.56
PKNOX1P55347 AP005432.1-201ENST00000580891 3485 ntBASIC5.31□□□□□ -1.56
PKNOX1P55347 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
PKNOX1P55347 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.3□□□□□ -1.56
PKNOX1P55347 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PKNOX1P55347 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PKNOX1P55347 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PKNOX1P55347 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
PKNOX1P55347 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PKNOX1P55347 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PKNOX1P55347 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
PKNOX1P55347 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms