Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
VCPP55072 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
VCPP55072 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
VCPP55072 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
VCPP55072 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.09□□□□□ -1.43
VCPP55072 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
VCPP55072 RN7SKP213-201ENST00000410746 298 ntBASIC6.09□□□□□ -1.43
VCPP55072 RN7SKP29-201ENST00000410957 272 ntBASIC6.09□□□□□ -1.43
VCPP55072 METTL15P3-201ENST00000415522 1221 ntBASIC6.09□□□□□ -1.43
VCPP55072 AK4P4-201ENST00000419465 646 ntBASIC6.09□□□□□ -1.43
VCPP55072 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.09□□□□□ -1.43
VCPP55072 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.09□□□□□ -1.43
VCPP55072 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.09□□□□□ -1.43
VCPP55072 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.09□□□□□ -1.43
VCPP55072 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.09□□□□□ -1.43
VCPP55072 HMGB3P24-201ENST00000433260 622 ntBASIC6.09□□□□□ -1.43
VCPP55072 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.09□□□□□ -1.43
VCPP55072 RPSAP41-201ENST00000439695 860 ntBASIC6.09□□□□□ -1.43
VCPP55072 DNAJB5P1-201ENST00000454004 806 ntBASIC6.09□□□□□ -1.43
VCPP55072 AC079841.1-201ENST00000481228 950 ntBASIC6.09□□□□□ -1.43
VCPP55072 CEACAMP10-202ENST00000495431 496 ntBASIC6.09□□□□□ -1.43
VCPP55072 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC6.09□□□□□ -1.43
VCPP55072 NPM1P21-201ENST00000513394 762 ntBASIC6.09□□□□□ -1.43
VCPP55072 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.09□□□□□ -1.43
VCPP55072 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.09□□□□□ -1.43
VCPP55072 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.09□□□□□ -1.43
VCPP55072 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC6.09□□□□□ -1.43
VCPP55072 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.09□□□□□ -1.43
VCPP55072 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC6.09□□□□□ -1.43
VCPP55072 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.09□□□□□ -1.43
VCPP55072 AL121612.2-201ENST00000612261 482 ntBASIC6.09□□□□□ -1.43
VCPP55072 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.09□□□□□ -1.43
VCPP55072 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
VCPP55072 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
VCPP55072 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.09□□□□□ -1.43
VCPP55072 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.09□□□□□ -1.43
VCPP55072 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
VCPP55072 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
VCPP55072 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
VCPP55072 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
VCPP55072 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.09□□□□□ -1.43
VCPP55072 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.09□□□□□ -1.44
VCPP55072 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.09□□□□□ -1.44
VCPP55072 AC131971.1-201ENST00000332881 1482 ntBASIC6.09□□□□□ -1.44
VCPP55072 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
VCPP55072 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
VCPP55072 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VCPP55072 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
VCPP55072 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VCPP55072 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VCPP55072 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC6.08□□□□□ -1.44
VCPP55072 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VCPP55072 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.08□□□□□ -1.44
VCPP55072 AC093671.1-201ENST00000624981 2929 ntBASIC6.08□□□□□ -1.44
VCPP55072 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
VCPP55072 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VCPP55072 RAB28P1-201ENST00000411517 641 ntBASIC6.08□□□□□ -1.44
VCPP55072 CRIP1P1-201ENST00000427567 185 ntBASIC6.08□□□□□ -1.44
VCPP55072 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.08□□□□□ -1.44
VCPP55072 RPS23P9-201ENST00000448848 438 ntBASIC6.08□□□□□ -1.44
VCPP55072 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.08□□□□□ -1.44
VCPP55072 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.08□□□□□ -1.44
VCPP55072 AL157777.1-201ENST00000468100 304 ntBASIC6.08□□□□□ -1.44
VCPP55072 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.08□□□□□ -1.44
VCPP55072 AC093890.1-201ENST00000502554 540 ntBASIC6.08□□□□□ -1.44
VCPP55072 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.08□□□□□ -1.44
VCPP55072 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.08□□□□□ -1.44
VCPP55072 AL513327.3-201ENST00000602618 469 ntBASIC6.08□□□□□ -1.44
VCPP55072 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.08□□□□□ -1.44
VCPP55072 AC133644.2-201ENST00000608142 540 ntBASIC6.08□□□□□ -1.44
VCPP55072 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
VCPP55072 MIR6837-201ENST00000620884 64 ntBASIC6.08□□□□□ -1.44
VCPP55072 METTL15-211ENST00000634762 718 ntTSL 5 BASIC6.08□□□□□ -1.44
VCPP55072 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VCPP55072 AL355488.2-201ENST00000609909 2850 ntBASIC6.08□□□□□ -1.44
VCPP55072 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC6.08□□□□□ -1.44
VCPP55072 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.08□□□□□ -1.44
VCPP55072 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
VCPP55072 PROS2P-201ENST00000474651 1951 ntBASIC6.07□□□□□ -1.44
VCPP55072 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
VCPP55072 FBXL21-201ENST00000297158 1305 ntBASIC6.07□□□□□ -1.44
VCPP55072 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.07□□□□□ -1.44
VCPP55072 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
VCPP55072 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
VCPP55072 AC009804.1-201ENST00000400949 179 ntBASIC6.07□□□□□ -1.44
VCPP55072 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.07□□□□□ -1.44
VCPP55072 FAR2P2-201ENST00000413041 594 ntBASIC6.07□□□□□ -1.44
VCPP55072 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.07□□□□□ -1.44
VCPP55072 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.07□□□□□ -1.44
VCPP55072 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.07□□□□□ -1.44
VCPP55072 MRPS21P2-201ENST00000424704 264 ntBASIC6.07□□□□□ -1.44
VCPP55072 FAR2P4-202ENST00000425399 584 ntBASIC6.07□□□□□ -1.44
VCPP55072 PSMD10P3-201ENST00000437000 448 ntBASIC6.07□□□□□ -1.44
VCPP55072 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.07□□□□□ -1.44
VCPP55072 FAR2P1-206ENST00000449736 709 ntBASIC6.07□□□□□ -1.44
VCPP55072 HIGD1AP8-201ENST00000453927 274 ntBASIC6.07□□□□□ -1.44
VCPP55072 RANP1-206ENST00000455094 651 ntBASIC6.07□□□□□ -1.44
VCPP55072 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC6.07□□□□□ -1.44
VCPP55072 AC004129.2-201ENST00000457229 287 ntBASIC6.07□□□□□ -1.44
VCPP55072 AC100832.1-201ENST00000471945 383 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms