Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.19□□□□□ -1.42
COPAP53621 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.19□□□□□ -1.42
COPAP53621 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC6.19□□□□□ -1.42
COPAP53621 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC6.19□□□□□ -1.42
COPAP53621 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COPAP53621 AC067838.1-201ENST00000606064 577 ntBASIC6.19□□□□□ -1.42
COPAP53621 AC016597.2-201ENST00000613256 341 ntBASIC6.19□□□□□ -1.42
COPAP53621 AC069234.4-201ENST00000621276 412 ntBASIC6.19□□□□□ -1.42
COPAP53621 MIR4302-201ENST00000638058 60 ntBASIC6.19□□□□□ -1.42
COPAP53621 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.19□□□□□ -1.42
COPAP53621 AC116667.2-201ENST00000641075 823 ntBASIC6.19□□□□□ -1.42
COPAP53621 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.19□□□□□ -1.42
COPAP53621 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COPAP53621 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC6.19□□□□□ -1.42
COPAP53621 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.19□□□□□ -1.42
COPAP53621 AC097461.1-201ENST00000568928 2821 ntBASIC6.19□□□□□ -1.42
COPAP53621 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.19□□□□□ -1.42
COPAP53621 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COPAP53621 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
COPAP53621 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
COPAP53621 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COPAP53621 AF287957.1-201ENST00000607368 1595 ntBASIC6.18□□□□□ -1.42
COPAP53621 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COPAP53621 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COPAP53621 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
COPAP53621 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COPAP53621 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.18□□□□□ -1.42
COPAP53621 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
COPAP53621 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.18□□□□□ -1.42
COPAP53621 AC107021.2-201ENST00000567714 2095 ntBASIC6.18□□□□□ -1.42
COPAP53621 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.18□□□□□ -1.42
COPAP53621 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.18□□□□□ -1.42
COPAP53621 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
COPAP53621 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COPAP53621 RNU6-792P-201ENST00000363490 107 ntBASIC6.18□□□□□ -1.42
COPAP53621 RN7SKP81-201ENST00000365603 331 ntBASIC6.18□□□□□ -1.42
COPAP53621 AL672167.2-201ENST00000377164 879 ntBASIC6.18□□□□□ -1.42
COPAP53621 RNA5SP284-201ENST00000384547 118 ntBASIC6.18□□□□□ -1.42
COPAP53621 RNU11-201ENST00000387069 134 ntBASIC6.18□□□□□ -1.42
COPAP53621 SNORA17A-201ENST00000391185 133 ntBASIC6.18□□□□□ -1.42
COPAP53621 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.18□□□□□ -1.42
COPAP53621 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC6.18□□□□□ -1.42
COPAP53621 AL354890.1-201ENST00000413730 346 ntBASIC6.18□□□□□ -1.42
COPAP53621 RPS7P8-201ENST00000418311 581 ntBASIC6.18□□□□□ -1.42
COPAP53621 AC015977.1-201ENST00000418887 292 ntBASIC6.18□□□□□ -1.42
COPAP53621 ARL2BPP3-201ENST00000421226 480 ntBASIC6.18□□□□□ -1.42
COPAP53621 CHEK2P5-201ENST00000423877 246 ntBASIC6.18□□□□□ -1.42
COPAP53621 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.18□□□□□ -1.42
COPAP53621 MRPL50P1-201ENST00000431951 384 ntBASIC6.18□□□□□ -1.42
COPAP53621 AC242426.1-201ENST00000435270 960 ntBASIC6.18□□□□□ -1.42
COPAP53621 VN1R110P-201ENST00000438988 971 ntBASIC6.18□□□□□ -1.42
COPAP53621 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC6.18□□□□□ -1.42
COPAP53621 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.18□□□□□ -1.42
COPAP53621 MOB1AP2-201ENST00000446060 614 ntBASIC6.18□□□□□ -1.42
COPAP53621 RPS27AP3-201ENST00000453803 454 ntBASIC6.18□□□□□ -1.42
COPAP53621 NPM1P17-201ENST00000479221 602 ntBASIC6.18□□□□□ -1.42
COPAP53621 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC6.18□□□□□ -1.42
COPAP53621 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COPAP53621 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COPAP53621 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC6.18□□□□□ -1.42
COPAP53621 RNU6-334P-201ENST00000517072 102 ntBASIC6.18□□□□□ -1.42
COPAP53621 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.18□□□□□ -1.42
COPAP53621 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.18□□□□□ -1.42
COPAP53621 AC008429.4-201ENST00000521201 182 ntBASIC6.18□□□□□ -1.42
COPAP53621 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.18□□□□□ -1.42
COPAP53621 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC6.18□□□□□ -1.42
COPAP53621 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.18□□□□□ -1.42
COPAP53621 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC6.18□□□□□ -1.42
COPAP53621 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.18□□□□□ -1.42
COPAP53621 AC005244.1-201ENST00000582566 339 ntBASIC6.18□□□□□ -1.42
COPAP53621 MIR4760-201ENST00000585040 80 ntBASIC6.18□□□□□ -1.42
COPAP53621 OR1AB1P-201ENST00000585564 761 ntBASIC6.18□□□□□ -1.42
COPAP53621 AL360012.1-201ENST00000602813 131 ntBASIC6.18□□□□□ -1.42
COPAP53621 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.18□□□□□ -1.42
COPAP53621 AP004372.1-201ENST00000604842 844 ntBASIC6.18□□□□□ -1.42
COPAP53621 AL645933.2-201ENST00000606743 1207 ntBASIC6.18□□□□□ -1.42
COPAP53621 AC093388.1-201ENST00000609166 430 ntBASIC6.18□□□□□ -1.42
COPAP53621 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC6.18□□□□□ -1.42
COPAP53621 MIR6793-201ENST00000612376 63 ntBASIC6.18□□□□□ -1.42
COPAP53621 AC104763.3-201ENST00000613765 618 ntBASIC6.18□□□□□ -1.42
COPAP53621 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COPAP53621 AC018926.1-201ENST00000616335 435 ntBASIC6.18□□□□□ -1.42
COPAP53621 AL031658.2-201ENST00000616850 651 ntBASIC6.18□□□□□ -1.42
COPAP53621 AC009269.6-201ENST00000621778 588 ntBASIC6.18□□□□□ -1.42
COPAP53621 SNORA17.5-201ENST00000630429 132 ntBASIC6.18□□□□□ -1.42
COPAP53621 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC6.18□□□□□ -1.42
COPAP53621 AC092070.2-203ENST00000598377 3644 ntBASIC6.18□□□□□ -1.42
COPAP53621 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
COPAP53621 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COPAP53621 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COPAP53621 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
COPAP53621 AC232271.1-201ENST00000602455 2715 ntBASIC6.18□□□□□ -1.42
COPAP53621 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COPAP53621 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COPAP53621 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COPAP53621 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COPAP53621 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
COPAP53621 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
COPAP53621 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.17□□□□□ -1.42
COPAP53621 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms