Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC6.57□□□□□ -1.36
TM4SF4P48230 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC6.57□□□□□ -1.36
TM4SF4P48230 PCNPP1-201ENST00000552501 511 ntBASIC6.57□□□□□ -1.36
TM4SF4P48230 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC6.57□□□□□ -1.36
TM4SF4P48230 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC6.57□□□□□ -1.36
TM4SF4P48230 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.57□□□□□ -1.36
TM4SF4P48230 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TM4SF4P48230 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.57□□□□□ -1.36
TM4SF4P48230 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.57□□□□□ -1.36
TM4SF4P48230 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TM4SF4P48230 AP003119.3-201ENST00000566747 4192 ntBASIC6.57□□□□□ -1.36
TM4SF4P48230 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.57□□□□□ -1.36
TM4SF4P48230 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
TM4SF4P48230 AL731556.1-201ENST00000394628 3711 ntBASIC6.57□□□□□ -1.36
TM4SF4P48230 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TM4SF4P48230 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC6.57□□□□□ -1.36
TM4SF4P48230 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TM4SF4P48230 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TM4SF4P48230 ZNF658B-201ENST00000602828 3408 ntBASIC6.57□□□□□ -1.36
TM4SF4P48230 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
TM4SF4P48230 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TM4SF4P48230 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.57□□□□□ -1.36
TM4SF4P48230 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.57□□□□□ -1.36
TM4SF4P48230 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
TM4SF4P48230 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.56□□□□□ -1.36
TM4SF4P48230 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TM4SF4P48230 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.56□□□□□ -1.36
TM4SF4P48230 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.56□□□□□ -1.36
TM4SF4P48230 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.56□□□□□ -1.36
TM4SF4P48230 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC6.56□□□□□ -1.36
TM4SF4P48230 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC6.56□□□□□ -1.36
TM4SF4P48230 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
TM4SF4P48230 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TM4SF4P48230 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.56□□□□□ -1.36
TM4SF4P48230 MFSD8-217ENST00000641178 4374 ntBASIC6.56□□□□□ -1.36
TM4SF4P48230 RAD1P1-201ENST00000231383 813 ntBASIC6.56□□□□□ -1.36
TM4SF4P48230 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
TM4SF4P48230 AL672167.2-201ENST00000377164 879 ntBASIC6.56□□□□□ -1.36
TM4SF4P48230 RNA5SP339-201ENST00000390987 122 ntBASIC6.56□□□□□ -1.36
TM4SF4P48230 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TM4SF4P48230 CYB5AP4-201ENST00000396692 399 ntBASIC6.56□□□□□ -1.36
TM4SF4P48230 AL356967.1-201ENST00000406305 431 ntBASIC6.56□□□□□ -1.36
TM4SF4P48230 AL353626.3-201ENST00000413399 657 ntBASIC6.56□□□□□ -1.36
TM4SF4P48230 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC6.56□□□□□ -1.36
TM4SF4P48230 AC098583.1-201ENST00000480875 255 ntBASIC6.56□□□□□ -1.36
TM4SF4P48230 AC105233.1-201ENST00000498840 781 ntBASIC6.56□□□□□ -1.36
TM4SF4P48230 BRD9P1-201ENST00000529855 560 ntBASIC6.56□□□□□ -1.36
TM4SF4P48230 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC6.56□□□□□ -1.36
TM4SF4P48230 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.56□□□□□ -1.36
TM4SF4P48230 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC6.56□□□□□ -1.36
TM4SF4P48230 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.56□□□□□ -1.36
TM4SF4P48230 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC6.56□□□□□ -1.36
TM4SF4P48230 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.56□□□□□ -1.36
TM4SF4P48230 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC6.56□□□□□ -1.36
TM4SF4P48230 MIR378J-201ENST00000611988 109 ntBASIC6.56□□□□□ -1.36
TM4SF4P48230 AC090607.5-201ENST00000615692 224 ntBASIC6.56□□□□□ -1.36
TM4SF4P48230 AC009120.7-201ENST00000623452 780 ntBASIC6.56□□□□□ -1.36
TM4SF4P48230 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC6.56□□□□□ -1.36
TM4SF4P48230 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TM4SF4P48230 AC011493.1-201ENST00000596753 1632 ntBASIC6.56□□□□□ -1.36
TM4SF4P48230 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.56□□□□□ -1.36
TM4SF4P48230 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
TM4SF4P48230 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
TM4SF4P48230 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
TM4SF4P48230 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
TM4SF4P48230 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TM4SF4P48230 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
TM4SF4P48230 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
TM4SF4P48230 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TM4SF4P48230 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
TM4SF4P48230 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
TM4SF4P48230 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
TM4SF4P48230 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
TM4SF4P48230 MAPK10-344ENST00000641718 3746 ntBASIC6.55□□□□□ -1.36
TM4SF4P48230 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.55□□□□□ -1.36
TM4SF4P48230 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
TM4SF4P48230 RNU1-43P-201ENST00000365052 165 ntBASIC6.55□□□□□ -1.36
TM4SF4P48230 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
TM4SF4P48230 MTCYBP7-201ENST00000419540 1134 ntBASIC6.55□□□□□ -1.36
TM4SF4P48230 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TM4SF4P48230 AC245028.1-201ENST00000423259 256 ntBASIC6.55□□□□□ -1.36
TM4SF4P48230 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.55□□□□□ -1.36
TM4SF4P48230 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC6.55□□□□□ -1.36
TM4SF4P48230 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC6.55□□□□□ -1.36
TM4SF4P48230 AC006335.2-201ENST00000437993 330 ntBASIC6.55□□□□□ -1.36
TM4SF4P48230 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC6.55□□□□□ -1.36
TM4SF4P48230 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TM4SF4P48230 RPS29P33-201ENST00000456717 146 ntBASIC6.55□□□□□ -1.36
TM4SF4P48230 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC6.55□□□□□ -1.36
TM4SF4P48230 AL603882.1-201ENST00000463059 681 ntBASIC6.55□□□□□ -1.36
TM4SF4P48230 OR11I1P-201ENST00000486033 954 ntBASIC6.55□□□□□ -1.36
TM4SF4P48230 MTND3P3-201ENST00000505004 126 ntBASIC6.55□□□□□ -1.36
TM4SF4P48230 MIR2117-201ENST00000516780 80 ntBASIC6.55□□□□□ -1.36
TM4SF4P48230 IGLVIV-66-1-201ENST00000521832 460 ntBASIC6.55□□□□□ -1.36
TM4SF4P48230 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC6.55□□□□□ -1.36
TM4SF4P48230 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.55□□□□□ -1.36
TM4SF4P48230 DUX4L52-201ENST00000549363 777 ntBASIC6.55□□□□□ -1.36
TM4SF4P48230 AC233266.2-201ENST00000567067 528 ntBASIC6.55□□□□□ -1.36
TM4SF4P48230 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC6.55□□□□□ -1.36
TM4SF4P48230 MIR3934-201ENST00000579806 107 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms