Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.98□□□□□ -1.45
SSR1P43307 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SSR1P43307 AC068870.1-201ENST00000563737 2455 ntBASIC5.98□□□□□ -1.45
SSR1P43307 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SSR1P43307 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SSR1P43307 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SSR1P43307 RNA5SP273-201ENST00000362484 113 ntBASIC5.98□□□□□ -1.45
SSR1P43307 AC007068.1-201ENST00000396690 844 ntBASIC5.98□□□□□ -1.45
SSR1P43307 NIFKP3-201ENST00000417799 865 ntBASIC5.98□□□□□ -1.45
SSR1P43307 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.98□□□□□ -1.45
SSR1P43307 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.98□□□□□ -1.45
SSR1P43307 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.98□□□□□ -1.45
SSR1P43307 GAPDHP48-201ENST00000436626 961 ntBASIC5.98□□□□□ -1.45
SSR1P43307 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.98□□□□□ -1.45
SSR1P43307 VN1R110P-201ENST00000438988 971 ntBASIC5.98□□□□□ -1.45
SSR1P43307 MTND6P18-201ENST00000439477 513 ntBASIC5.98□□□□□ -1.45
SSR1P43307 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.98□□□□□ -1.45
SSR1P43307 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.98□□□□□ -1.45
SSR1P43307 AC068491.1-201ENST00000449539 1241 ntBASIC5.98□□□□□ -1.45
SSR1P43307 NPM1P39-201ENST00000449818 867 ntBASIC5.98□□□□□ -1.45
SSR1P43307 AC239798.3-201ENST00000454459 408 ntBASIC5.98□□□□□ -1.45
SSR1P43307 AC019084.1-201ENST00000457337 432 ntBASIC5.98□□□□□ -1.45
SSR1P43307 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.98□□□□□ -1.45
SSR1P43307 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.98□□□□□ -1.45
SSR1P43307 GLUD1P3-202ENST00000508551 200 ntBASIC5.98□□□□□ -1.45
SSR1P43307 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.98□□□□□ -1.45
SSR1P43307 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.98□□□□□ -1.45
SSR1P43307 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.98□□□□□ -1.45
SSR1P43307 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.98□□□□□ -1.45
SSR1P43307 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.98□□□□□ -1.45
SSR1P43307 AC137627.1-201ENST00000545761 289 ntBASIC5.98□□□□□ -1.45
SSR1P43307 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.98□□□□□ -1.45
SSR1P43307 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.98□□□□□ -1.45
SSR1P43307 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.98□□□□□ -1.45
SSR1P43307 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.98□□□□□ -1.45
SSR1P43307 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.98□□□□□ -1.45
SSR1P43307 AC133552.5-201ENST00000604266 540 ntBASIC5.98□□□□□ -1.45
SSR1P43307 NANOGP3-201ENST00000605855 286 ntBASIC5.98□□□□□ -1.45
SSR1P43307 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.98□□□□□ -1.45
SSR1P43307 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SSR1P43307 AL591926.1-201ENST00000620542 217 ntBASIC5.98□□□□□ -1.45
SSR1P43307 AC022400.9-201ENST00000623633 273 ntBASIC5.98□□□□□ -1.45
SSR1P43307 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.98□□□□□ -1.45
SSR1P43307 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SSR1P43307 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.98□□□□□ -1.45
SSR1P43307 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SSR1P43307 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SSR1P43307 IFIT1P1-201ENST00000400497 1449 ntBASIC5.98□□□□□ -1.45
SSR1P43307 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.98□□□□□ -1.45
SSR1P43307 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.97□□□□□ -1.45
SSR1P43307 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SSR1P43307 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
SSR1P43307 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SSR1P43307 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.97□□□□□ -1.45
SSR1P43307 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.97□□□□□ -1.45
SSR1P43307 RNA5SP477-201ENST00000362639 119 ntBASIC5.97□□□□□ -1.45
SSR1P43307 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.97□□□□□ -1.45
SSR1P43307 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.97□□□□□ -1.45
SSR1P43307 RPS6P23-201ENST00000413224 722 ntBASIC5.97□□□□□ -1.45
SSR1P43307 AC115283.1-201ENST00000427353 400 ntBASIC5.97□□□□□ -1.45
SSR1P43307 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
SSR1P43307 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.97□□□□□ -1.45
SSR1P43307 AC138761.5-201ENST00000433967 325 ntBASIC5.97□□□□□ -1.45
SSR1P43307 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.97□□□□□ -1.45
SSR1P43307 PCBP2P1-201ENST00000437262 977 ntBASIC5.97□□□□□ -1.45
SSR1P43307 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.97□□□□□ -1.45
SSR1P43307 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.97□□□□□ -1.45
SSR1P43307 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SSR1P43307 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SSR1P43307 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.97□□□□□ -1.45
SSR1P43307 AP002884.1-201ENST00000479691 655 ntBASIC5.97□□□□□ -1.45
SSR1P43307 LSM3P4-201ENST00000502948 309 ntBASIC5.97□□□□□ -1.45
SSR1P43307 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.97□□□□□ -1.45
SSR1P43307 RFPL4AP3-201ENST00000515267 345 ntBASIC5.97□□□□□ -1.45
SSR1P43307 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.97□□□□□ -1.45
SSR1P43307 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.97□□□□□ -1.45
SSR1P43307 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.97□□□□□ -1.45
SSR1P43307 AC139697.1-201ENST00000548429 745 ntBASIC5.97□□□□□ -1.45
SSR1P43307 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.97□□□□□ -1.45
SSR1P43307 AGGF1P7-201ENST00000562369 913 ntBASIC5.97□□□□□ -1.45
SSR1P43307 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.97□□□□□ -1.45
SSR1P43307 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.97□□□□□ -1.45
SSR1P43307 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.97□□□□□ -1.45
SSR1P43307 AC092944.2-201ENST00000605443 889 ntBASIC5.97□□□□□ -1.45
SSR1P43307 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.97□□□□□ -1.45
SSR1P43307 MIR7109-201ENST00000613748 65 ntBASIC5.97□□□□□ -1.45
SSR1P43307 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.97□□□□□ -1.45
SSR1P43307 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.97□□□□□ -1.45
SSR1P43307 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SSR1P43307 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.97□□□□□ -1.45
SSR1P43307 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.97□□□□□ -1.45
SSR1P43307 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.97□□□□□ -1.45
SSR1P43307 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.97□□□□□ -1.45
SSR1P43307 SSXP3-201ENST00000442971 1300 ntBASIC5.97□□□□□ -1.45
SSR1P43307 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
SSR1P43307 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
SSR1P43307 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SSR1P43307 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SSR1P43307 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
SSR1P43307 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms