Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.23□□□□□ -1.57
APOBEC1P41238 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.23□□□□□ -1.57
APOBEC1P41238 AC093763.2-201ENST00000505334 1223 ntBASIC5.23□□□□□ -1.57
APOBEC1P41238 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
APOBEC1P41238 SNORA76.2-201ENST00000517095 137 ntBASIC5.23□□□□□ -1.57
APOBEC1P41238 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.23□□□□□ -1.57
APOBEC1P41238 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.23□□□□□ -1.57
APOBEC1P41238 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.23□□□□□ -1.57
APOBEC1P41238 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
APOBEC1P41238 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.23□□□□□ -1.57
APOBEC1P41238 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.23□□□□□ -1.57
APOBEC1P41238 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC5.23□□□□□ -1.57
APOBEC1P41238 ZNF322P1-201ENST00000568013 1209 ntBASIC5.23□□□□□ -1.57
APOBEC1P41238 AC092121.1-201ENST00000569452 202 ntBASIC5.23□□□□□ -1.57
APOBEC1P41238 ZNF92P2-201ENST00000600543 1059 ntBASIC5.23□□□□□ -1.57
APOBEC1P41238 AC067838.1-201ENST00000606064 577 ntBASIC5.23□□□□□ -1.57
APOBEC1P41238 AC242628.1-201ENST00000606810 391 ntBASIC5.23□□□□□ -1.57
APOBEC1P41238 AC108865.2-201ENST00000606881 432 ntBASIC5.23□□□□□ -1.57
APOBEC1P41238 AL645927.2-201ENST00000618350 349 ntBASIC5.23□□□□□ -1.57
APOBEC1P41238 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.23□□□□□ -1.57
APOBEC1P41238 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.23□□□□□ -1.57
APOBEC1P41238 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.23□□□□□ -1.57
APOBEC1P41238 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.23□□□□□ -1.57
APOBEC1P41238 OR5AC4P-202ENST00000642086 985 ntBASIC5.23□□□□□ -1.57
APOBEC1P41238 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC5.23□□□□□ -1.57
APOBEC1P41238 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.23□□□□□ -1.57
APOBEC1P41238 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
APOBEC1P41238 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
APOBEC1P41238 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.23□□□□□ -1.57
APOBEC1P41238 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
APOBEC1P41238 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
APOBEC1P41238 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
APOBEC1P41238 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
APOBEC1P41238 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
APOBEC1P41238 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
APOBEC1P41238 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
APOBEC1P41238 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
APOBEC1P41238 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.22□□□□□ -1.57
APOBEC1P41238 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.22□□□□□ -1.57
APOBEC1P41238 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
APOBEC1P41238 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.22□□□□□ -1.57
APOBEC1P41238 RNU6-650P-201ENST00000365658 111 ntBASIC5.22□□□□□ -1.57
APOBEC1P41238 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
APOBEC1P41238 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
APOBEC1P41238 RNA5SP91-201ENST00000390902 119 ntBASIC5.22□□□□□ -1.57
APOBEC1P41238 RN7SKP240-201ENST00000410583 375 ntBASIC5.22□□□□□ -1.57
APOBEC1P41238 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.22□□□□□ -1.57
APOBEC1P41238 DSTNP5-201ENST00000427921 523 ntBASIC5.22□□□□□ -1.57
APOBEC1P41238 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.22□□□□□ -1.57
APOBEC1P41238 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.22□□□□□ -1.57
APOBEC1P41238 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.22□□□□□ -1.57
APOBEC1P41238 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.22□□□□□ -1.57
APOBEC1P41238 AC002075.1-201ENST00000457396 676 ntBASIC5.22□□□□□ -1.57
APOBEC1P41238 EIF2S2P5-201ENST00000457635 968 ntBASIC5.22□□□□□ -1.57
APOBEC1P41238 RPSAP39-201ENST00000467439 883 ntBASIC5.22□□□□□ -1.57
APOBEC1P41238 NPM1P28-201ENST00000492269 840 ntBASIC5.22□□□□□ -1.57
APOBEC1P41238 AC021087.2-201ENST00000504656 1203 ntBASIC5.22□□□□□ -1.57
APOBEC1P41238 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.22□□□□□ -1.57
APOBEC1P41238 ST13P12-201ENST00000508958 1094 ntBASIC5.22□□□□□ -1.57
APOBEC1P41238 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.22□□□□□ -1.57
APOBEC1P41238 RNU6-1102P-201ENST00000516149 96 ntBASIC5.22□□□□□ -1.57
APOBEC1P41238 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.22□□□□□ -1.57
APOBEC1P41238 OSBPL9P3-201ENST00000534523 595 ntBASIC5.22□□□□□ -1.57
APOBEC1P41238 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC5.22□□□□□ -1.57
APOBEC1P41238 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.22□□□□□ -1.57
APOBEC1P41238 AC068305.2-201ENST00000550567 1205 ntBASIC5.22□□□□□ -1.57
APOBEC1P41238 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.22□□□□□ -1.57
APOBEC1P41238 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.22□□□□□ -1.57
APOBEC1P41238 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.22□□□□□ -1.57
APOBEC1P41238 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.22□□□□□ -1.57
APOBEC1P41238 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.22□□□□□ -1.57
APOBEC1P41238 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
APOBEC1P41238 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
APOBEC1P41238 HIRAP1-201ENST00000605318 787 ntBASIC5.22□□□□□ -1.57
APOBEC1P41238 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.22□□□□□ -1.57
APOBEC1P41238 AC005021.1-201ENST00000608730 355 ntBASIC5.22□□□□□ -1.57
APOBEC1P41238 AL096712.1-201ENST00000614561 159 ntBASIC5.22□□□□□ -1.57
APOBEC1P41238 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.22□□□□□ -1.57
APOBEC1P41238 AL590396.2-201ENST00000636511 1041 ntBASIC5.22□□□□□ -1.57
APOBEC1P41238 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
APOBEC1P41238 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
APOBEC1P41238 AC025470.1-201ENST00000510053 2032 ntBASIC5.22□□□□□ -1.57
APOBEC1P41238 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
APOBEC1P41238 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
APOBEC1P41238 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
APOBEC1P41238 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
APOBEC1P41238 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
APOBEC1P41238 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
APOBEC1P41238 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
APOBEC1P41238 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.22□□□□□ -1.57
APOBEC1P41238 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.22□□□□□ -1.57
APOBEC1P41238 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
APOBEC1P41238 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
APOBEC1P41238 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.21□□□□□ -1.57
APOBEC1P41238 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
APOBEC1P41238 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
APOBEC1P41238 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
APOBEC1P41238 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
APOBEC1P41238 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.21□□□□□ -1.58
APOBEC1P41238 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms