Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
PDE6BP35913 ZNF29P-201ENST00000225587 168 ntBASIC7.51□□□□□ -1.21
PDE6BP35913 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
PDE6BP35913 SELENOWP1-201ENST00000322792 252 ntBASIC7.51□□□□□ -1.21
PDE6BP35913 GAPDHP24-201ENST00000328713 983 ntBASIC7.51□□□□□ -1.21
PDE6BP35913 RNA5SP394-201ENST00000364216 119 ntBASIC7.51□□□□□ -1.21
PDE6BP35913 SKINT1L-201ENST00000401057 817 ntBASIC7.51□□□□□ -1.21
PDE6BP35913 AL049545.1-201ENST00000401856 572 ntBASIC7.51□□□□□ -1.21
PDE6BP35913 HMGB1P20-201ENST00000402555 677 ntBASIC7.51□□□□□ -1.21
PDE6BP35913 SPTLC1P2-201ENST00000407089 121 ntBASIC7.51□□□□□ -1.21
PDE6BP35913 SNRPEP6-201ENST00000407465 277 ntBASIC7.51□□□□□ -1.21
PDE6BP35913 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC7.51□□□□□ -1.21
PDE6BP35913 AL592310.1-201ENST00000414330 671 ntBASIC7.51□□□□□ -1.21
PDE6BP35913 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
PDE6BP35913 RCC2P2-201ENST00000422174 918 ntBASIC7.51□□□□□ -1.21
PDE6BP35913 AC127526.2-201ENST00000426436 775 ntBASIC7.51□□□□□ -1.21
PDE6BP35913 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC7.51□□□□□ -1.21
PDE6BP35913 SPRYD7P1-201ENST00000443861 570 ntBASIC7.51□□□□□ -1.21
PDE6BP35913 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC7.51□□□□□ -1.21
PDE6BP35913 AC010468.1-201ENST00000461022 817 ntBASIC7.51□□□□□ -1.21
PDE6BP35913 AC023818.1-201ENST00000498379 384 ntBASIC7.51□□□□□ -1.21
PDE6BP35913 MTCO2P9-201ENST00000503214 694 ntBASIC7.51□□□□□ -1.21
PDE6BP35913 AC138409.2-202ENST00000507274 458 ntBASIC7.51□□□□□ -1.21
PDE6BP35913 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC7.51□□□□□ -1.21
PDE6BP35913 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC7.51□□□□□ -1.21
PDE6BP35913 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC7.51□□□□□ -1.21
PDE6BP35913 BX510359.5-201ENST00000515651 304 ntBASIC7.51□□□□□ -1.21
PDE6BP35913 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC7.51□□□□□ -1.21
PDE6BP35913 HMGN2P36-201ENST00000529541 409 ntBASIC7.51□□□□□ -1.21
PDE6BP35913 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
PDE6BP35913 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC7.51□□□□□ -1.21
PDE6BP35913 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC7.51□□□□□ -1.21
PDE6BP35913 OR4U1P-201ENST00000554958 912 ntBASIC7.51□□□□□ -1.21
PDE6BP35913 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC7.51□□□□□ -1.21
PDE6BP35913 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC7.51□□□□□ -1.21
PDE6BP35913 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC7.51□□□□□ -1.21
PDE6BP35913 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC7.51□□□□□ -1.21
PDE6BP35913 MIR8084-201ENST00000614105 89 ntBASIC7.51□□□□□ -1.21
PDE6BP35913 AC016769.4-201ENST00000616893 535 ntBASIC7.51□□□□□ -1.21
PDE6BP35913 AL445670.1-201ENST00000618889 801 ntBASIC7.51□□□□□ -1.21
PDE6BP35913 AC006927.2-201ENST00000639256 389 ntBASIC7.51□□□□□ -1.21
PDE6BP35913 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC7.51□□□□□ -1.21
PDE6BP35913 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PDE6BP35913 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
PDE6BP35913 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PDE6BP35913 JPX-212ENST00000639185 9658 ntTSL 5 BASIC7.51□□□□□ -1.21
PDE6BP35913 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC7.51□□□□□ -1.21
PDE6BP35913 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
PDE6BP35913 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
PDE6BP35913 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC7.51□□□□□ -1.21
PDE6BP35913 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.51□□□□□ -1.21
PDE6BP35913 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
PDE6BP35913 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
PDE6BP35913 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
PDE6BP35913 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
PDE6BP35913 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
PDE6BP35913 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC7.5□□□□□ -1.21
PDE6BP35913 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
PDE6BP35913 AC025809.2-201ENST00000625085 1802 ntBASIC7.5□□□□□ -1.21
PDE6BP35913 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
PDE6BP35913 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
PDE6BP35913 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
PDE6BP35913 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
PDE6BP35913 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC7.5□□□□□ -1.21
PDE6BP35913 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
PDE6BP35913 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
PDE6BP35913 U3.7-201ENST00000363668 216 ntBASIC7.5□□□□□ -1.21
PDE6BP35913 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
PDE6BP35913 AL391422.1-201ENST00000402155 436 ntBASIC7.5□□□□□ -1.21
PDE6BP35913 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC7.5□□□□□ -1.21
PDE6BP35913 RNU4-34P-201ENST00000410431 124 ntBASIC7.5□□□□□ -1.21
PDE6BP35913 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC7.5□□□□□ -1.21
PDE6BP35913 CCNB1IP1P1-201ENST00000428976 839 ntBASIC7.5□□□□□ -1.21
PDE6BP35913 AL512637.2-201ENST00000431287 1256 ntBASIC7.5□□□□□ -1.21
PDE6BP35913 EIF2S2P2-201ENST00000447161 982 ntBASIC7.5□□□□□ -1.21
PDE6BP35913 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC7.5□□□□□ -1.21
PDE6BP35913 AC092967.1-201ENST00000449016 481 ntBASIC7.5□□□□□ -1.21
PDE6BP35913 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC7.5□□□□□ -1.21
PDE6BP35913 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC7.5□□□□□ -1.21
PDE6BP35913 SNORD11.1-201ENST00000459482 85 ntBASIC7.5□□□□□ -1.21
PDE6BP35913 AL133445.1-201ENST00000467051 452 ntBASIC7.5□□□□□ -1.21
PDE6BP35913 PFN1P6-201ENST00000476786 399 ntBASIC7.5□□□□□ -1.21
PDE6BP35913 RPL32P9-201ENST00000487963 407 ntBASIC7.5□□□□□ -1.21
PDE6BP35913 GAPDHP71-201ENST00000511530 1003 ntBASIC7.5□□□□□ -1.21
PDE6BP35913 VTA1P2-201ENST00000520205 911 ntBASIC7.5□□□□□ -1.21
PDE6BP35913 AC104115.2-201ENST00000523026 687 ntBASIC7.5□□□□□ -1.21
PDE6BP35913 AC021451.1-201ENST00000523498 1129 ntBASIC7.5□□□□□ -1.21
PDE6BP35913 OR5D2P-201ENST00000524390 911 ntBASIC7.5□□□□□ -1.21
PDE6BP35913 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC7.5□□□□□ -1.21
PDE6BP35913 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
PDE6BP35913 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC7.5□□□□□ -1.21
PDE6BP35913 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC7.5□□□□□ -1.21
PDE6BP35913 AC018926.1-201ENST00000616335 435 ntBASIC7.5□□□□□ -1.21
PDE6BP35913 AC231759.1-201ENST00000616455 597 ntBASIC7.5□□□□□ -1.21
PDE6BP35913 RN7SL544P-201ENST00000617232 284 ntBASIC7.5□□□□□ -1.21
PDE6BP35913 HOTTIP_3.1-201ENST00000619957 337 ntBASIC7.5□□□□□ -1.21
PDE6BP35913 RN7SL763P-201ENST00000620922 284 ntBASIC7.5□□□□□ -1.21
PDE6BP35913 AC068880.4-201ENST00000623082 495 ntBASIC7.5□□□□□ -1.21
PDE6BP35913 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC7.5□□□□□ -1.21
PDE6BP35913 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms