Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 OR6E1P-201ENST00000414424 923 ntBASIC6.1□□□□□ -1.43
HOXD13P35453 RPL34P3-201ENST00000421454 338 ntBASIC6.1□□□□□ -1.43
HOXD13P35453 AL133173.1-201ENST00000423458 397 ntBASIC6.1□□□□□ -1.43
HOXD13P35453 MRPS21P2-201ENST00000424704 264 ntBASIC6.1□□□□□ -1.43
HOXD13P35453 AC106901.1-201ENST00000425086 698 ntBASIC6.1□□□□□ -1.43
HOXD13P35453 BX276092.6-201ENST00000430476 250 ntBASIC6.1□□□□□ -1.43
HOXD13P35453 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.1□□□□□ -1.43
HOXD13P35453 MTCO1P45-201ENST00000431457 267 ntBASIC6.1□□□□□ -1.43
HOXD13P35453 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HOXD13P35453 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.1□□□□□ -1.43
HOXD13P35453 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.1□□□□□ -1.43
HOXD13P35453 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.1□□□□□ -1.43
HOXD13P35453 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC6.1□□□□□ -1.43
HOXD13P35453 BX276092.8-201ENST00000455722 250 ntBASIC6.1□□□□□ -1.43
HOXD13P35453 NXT1P1-201ENST00000458481 316 ntBASIC6.1□□□□□ -1.43
HOXD13P35453 OR11I1P-201ENST00000486033 954 ntBASIC6.1□□□□□ -1.43
HOXD13P35453 CSNK1A1P3-201ENST00000504105 330 ntBASIC6.1□□□□□ -1.43
HOXD13P35453 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC6.1□□□□□ -1.43
HOXD13P35453 AC074087.1-201ENST00000512059 724 ntBASIC6.1□□□□□ -1.43
HOXD13P35453 SEPT10P1-201ENST00000517342 1162 ntBASIC6.1□□□□□ -1.43
HOXD13P35453 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.1□□□□□ -1.43
HOXD13P35453 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC6.1□□□□□ -1.43
HOXD13P35453 OR8Q1P-201ENST00000526467 655 ntBASIC6.1□□□□□ -1.43
HOXD13P35453 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.1□□□□□ -1.43
HOXD13P35453 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.1□□□□□ -1.43
HOXD13P35453 MRPS21P7-201ENST00000566937 238 ntBASIC6.1□□□□□ -1.43
HOXD13P35453 AC020978.7-201ENST00000575953 1187 ntBASIC6.1□□□□□ -1.43
HOXD13P35453 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.1□□□□□ -1.43
HOXD13P35453 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXD13P35453 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC6.1□□□□□ -1.43
HOXD13P35453 MIR6861-201ENST00000618657 64 ntBASIC6.1□□□□□ -1.43
HOXD13P35453 AL133370.2-201ENST00000619934 439 ntBASIC6.1□□□□□ -1.43
HOXD13P35453 AC015722.2-201ENST00000622210 551 ntBASIC6.1□□□□□ -1.43
HOXD13P35453 AC020763.5-201ENST00000623298 430 ntBASIC6.1□□□□□ -1.43
HOXD13P35453 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXD13P35453 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.1□□□□□ -1.43
HOXD13P35453 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.1□□□□□ -1.43
HOXD13P35453 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXD13P35453 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HOXD13P35453 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.1□□□□□ -1.43
HOXD13P35453 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.1□□□□□ -1.43
HOXD13P35453 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.1□□□□□ -1.43
HOXD13P35453 AC016745.2-201ENST00000608834 3443 ntBASIC6.1□□□□□ -1.43
HOXD13P35453 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
HOXD13P35453 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HOXD13P35453 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
HOXD13P35453 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
HOXD13P35453 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
HOXD13P35453 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HOXD13P35453 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
HOXD13P35453 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
HOXD13P35453 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
HOXD13P35453 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.09□□□□□ -1.43
HOXD13P35453 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
HOXD13P35453 RNA5SP105-201ENST00000391123 113 ntBASIC6.09□□□□□ -1.43
HOXD13P35453 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
HOXD13P35453 AL589655.1-201ENST00000405398 482 ntBASIC6.09□□□□□ -1.43
HOXD13P35453 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.09□□□□□ -1.43
HOXD13P35453 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.09□□□□□ -1.43
HOXD13P35453 GLUD1P9-201ENST00000420997 1173 ntBASIC6.09□□□□□ -1.43
HOXD13P35453 DSTNP5-201ENST00000427921 523 ntBASIC6.09□□□□□ -1.43
HOXD13P35453 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.09□□□□□ -1.43
HOXD13P35453 AC138761.5-201ENST00000433967 325 ntBASIC6.09□□□□□ -1.43
HOXD13P35453 NDUFB4P8-201ENST00000435351 367 ntBASIC6.09□□□□□ -1.43
HOXD13P35453 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
HOXD13P35453 RPS27AP2-201ENST00000457576 465 ntBASIC6.09□□□□□ -1.43
HOXD13P35453 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HOXD13P35453 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.09□□□□□ -1.43
HOXD13P35453 AC027544.3-201ENST00000535082 757 ntBASIC6.09□□□□□ -1.43
HOXD13P35453 AC008147.3-201ENST00000548666 354 ntBASIC6.09□□□□□ -1.43
HOXD13P35453 IGBP1P1-201ENST00000554337 1009 ntBASIC6.09□□□□□ -1.43
HOXD13P35453 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.09□□□□□ -1.43
HOXD13P35453 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.09□□□□□ -1.43
HOXD13P35453 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.09□□□□□ -1.43
HOXD13P35453 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC6.09□□□□□ -1.43
HOXD13P35453 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.09□□□□□ -1.43
HOXD13P35453 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC6.09□□□□□ -1.43
HOXD13P35453 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.09□□□□□ -1.43
HOXD13P35453 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.09□□□□□ -1.43
HOXD13P35453 RN7SL787P-201ENST00000613000 284 ntBASIC6.09□□□□□ -1.43
HOXD13P35453 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC6.09□□□□□ -1.43
HOXD13P35453 AC026367.3-201ENST00000619032 590 ntBASIC6.09□□□□□ -1.43
HOXD13P35453 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.09□□□□□ -1.43
HOXD13P35453 AC015660.5-201ENST00000623238 564 ntBASIC6.09□□□□□ -1.43
HOXD13P35453 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.09□□□□□ -1.43
HOXD13P35453 AC107021.2-201ENST00000567714 2095 ntBASIC6.09□□□□□ -1.43
HOXD13P35453 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HOXD13P35453 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.09□□□□□ -1.43
HOXD13P35453 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.09□□□□□ -1.44
HOXD13P35453 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
HOXD13P35453 AC007938.2-201ENST00000604666 2634 ntBASIC6.09□□□□□ -1.44
HOXD13P35453 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXD13P35453 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXD13P35453 OR51C1P-202ENST00000641159 1444 ntBASIC6.08□□□□□ -1.44
HOXD13P35453 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
HOXD13P35453 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
HOXD13P35453 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXD13P35453 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.08□□□□□ -1.44
HOXD13P35453 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXD13P35453 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms