Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 AC018809.2-201ENST00000602436 3823 ntBASIC5.85□□□□□ -1.47
CHRNA3P32297 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CHRNA3P32297 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CHRNA3P32297 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.85□□□□□ -1.47
CHRNA3P32297 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CHRNA3P32297 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.85□□□□□ -1.47
CHRNA3P32297 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CHRNA3P32297 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CHRNA3P32297 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CHRNA3P32297 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CHRNA3P32297 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CHRNA3P32297 RNA5SP242-201ENST00000364171 118 ntBASIC5.85□□□□□ -1.47
CHRNA3P32297 OR2AT2P-201ENST00000413438 905 ntBASIC5.85□□□□□ -1.47
CHRNA3P32297 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.85□□□□□ -1.47
CHRNA3P32297 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.85□□□□□ -1.47
CHRNA3P32297 AC002504.1-201ENST00000438281 691 ntBASIC5.85□□□□□ -1.47
CHRNA3P32297 AP000281.1-201ENST00000444036 316 ntBASIC5.85□□□□□ -1.47
CHRNA3P32297 AC018638.3-201ENST00000461273 132 ntBASIC5.85□□□□□ -1.47
CHRNA3P32297 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.85□□□□□ -1.47
CHRNA3P32297 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.85□□□□□ -1.47
CHRNA3P32297 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.85□□□□□ -1.47
CHRNA3P32297 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.85□□□□□ -1.47
CHRNA3P32297 HMGB1P42-201ENST00000532126 553 ntBASIC5.85□□□□□ -1.47
CHRNA3P32297 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.85□□□□□ -1.47
CHRNA3P32297 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.85□□□□□ -1.47
CHRNA3P32297 AC019322.1-201ENST00000571869 389 ntBASIC5.85□□□□□ -1.47
CHRNA3P32297 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.85□□□□□ -1.47
CHRNA3P32297 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.85□□□□□ -1.47
CHRNA3P32297 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CHRNA3P32297 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CHRNA3P32297 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.85□□□□□ -1.47
CHRNA3P32297 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CHRNA3P32297 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CHRNA3P32297 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
CHRNA3P32297 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CHRNA3P32297 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.85□□□□□ -1.47
CHRNA3P32297 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CHRNA3P32297 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CHRNA3P32297 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CHRNA3P32297 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
CHRNA3P32297 AC004158.1-201ENST00000564508 4319 ntBASIC5.85□□□□□ -1.47
CHRNA3P32297 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CHRNA3P32297 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CHRNA3P32297 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.84□□□□□ -1.47
CHRNA3P32297 GVINP1-202ENST00000531871 7271 ntBASIC5.84□□□□□ -1.47
CHRNA3P32297 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CHRNA3P32297 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CHRNA3P32297 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CHRNA3P32297 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CHRNA3P32297 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CHRNA3P32297 AP000473.2-201ENST00000602659 1537 ntBASIC5.84□□□□□ -1.47
CHRNA3P32297 AL359715.3-201ENST00000569267 2123 ntBASIC5.84□□□□□ -1.47
CHRNA3P32297 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CHRNA3P32297 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CHRNA3P32297 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
CHRNA3P32297 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CHRNA3P32297 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.84□□□□□ -1.47
CHRNA3P32297 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.84□□□□□ -1.47
CHRNA3P32297 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.84□□□□□ -1.47
CHRNA3P32297 AC233968.1-201ENST00000611212 1300 ntBASIC5.84□□□□□ -1.47
CHRNA3P32297 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CHRNA3P32297 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CHRNA3P32297 RNA5SP46-201ENST00000362370 120 ntBASIC5.84□□□□□ -1.47
CHRNA3P32297 RN7SKP293-201ENST00000411389 296 ntBASIC5.84□□□□□ -1.47
CHRNA3P32297 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.84□□□□□ -1.47
CHRNA3P32297 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.84□□□□□ -1.47
CHRNA3P32297 AL662874.1-201ENST00000426065 230 ntBASIC5.84□□□□□ -1.47
CHRNA3P32297 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.84□□□□□ -1.47
CHRNA3P32297 AL121578.1-201ENST00000428051 892 ntBASIC5.84□□□□□ -1.47
CHRNA3P32297 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CHRNA3P32297 IGBP1P3-201ENST00000447449 1000 ntBASIC5.84□□□□□ -1.47
CHRNA3P32297 AL596266.1-201ENST00000448132 400 ntBASIC5.84□□□□□ -1.47
CHRNA3P32297 MTND6P5-201ENST00000448266 512 ntBASIC5.84□□□□□ -1.47
CHRNA3P32297 TAAR4P-201ENST00000454843 1039 ntBASIC5.84□□□□□ -1.47
CHRNA3P32297 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.84□□□□□ -1.47
CHRNA3P32297 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.84□□□□□ -1.47
CHRNA3P32297 RPL32P33-201ENST00000487023 394 ntBASIC5.84□□□□□ -1.47
CHRNA3P32297 AC009120.1-201ENST00000493458 473 ntBASIC5.84□□□□□ -1.47
CHRNA3P32297 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.84□□□□□ -1.47
CHRNA3P32297 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.84□□□□□ -1.47
CHRNA3P32297 RNU6-615P-201ENST00000516065 106 ntBASIC5.84□□□□□ -1.47
CHRNA3P32297 SNORA43.3-201ENST00000517240 103 ntBASIC5.84□□□□□ -1.47
CHRNA3P32297 AC021678.3-201ENST00000517893 476 ntBASIC5.84□□□□□ -1.47
CHRNA3P32297 OR5AM1P-201ENST00000532136 1032 ntBASIC5.84□□□□□ -1.47
CHRNA3P32297 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.84□□□□□ -1.47
CHRNA3P32297 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.84□□□□□ -1.47
CHRNA3P32297 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.84□□□□□ -1.47
CHRNA3P32297 IGBP1P1-201ENST00000554337 1009 ntBASIC5.84□□□□□ -1.47
CHRNA3P32297 AC022404.1-201ENST00000555320 273 ntBASIC5.84□□□□□ -1.47
CHRNA3P32297 DPPA2P4-201ENST00000563717 878 ntBASIC5.84□□□□□ -1.47
CHRNA3P32297 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.84□□□□□ -1.47
CHRNA3P32297 SNORD95-201ENST00000579879 68 ntBASIC5.84□□□□□ -1.47
CHRNA3P32297 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.84□□□□□ -1.47
CHRNA3P32297 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.84□□□□□ -1.47
CHRNA3P32297 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.84□□□□□ -1.47
CHRNA3P32297 AC009237.13-201ENST00000603193 276 ntBASIC5.84□□□□□ -1.47
CHRNA3P32297 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.84□□□□□ -1.47
CHRNA3P32297 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.84□□□□□ -1.47
CHRNA3P32297 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
CHRNA3P32297 AC112255.1-201ENST00000624070 2493 ntBASIC5.84□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms