Protein–RNA interactions for Protein: P29466

CASP1, Caspase-1, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1P29466 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CASP1P29466 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CASP1P29466 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
CASP1P29466 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
CASP1P29466 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.93□□□□□ -1.46
CASP1P29466 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.93□□□□□ -1.46
CASP1P29466 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CASP1P29466 RNA5SP319-201ENST00000362768 119 ntBASIC5.93□□□□□ -1.46
CASP1P29466 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.93□□□□□ -1.46
CASP1P29466 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.93□□□□□ -1.46
CASP1P29466 AC104843.2-201ENST00000427666 297 ntBASIC5.93□□□□□ -1.46
CASP1P29466 HSPD1P12-201ENST00000429127 1069 ntBASIC5.93□□□□□ -1.46
CASP1P29466 AC002069.1-201ENST00000429649 1159 ntBASIC5.93□□□□□ -1.46
CASP1P29466 AC124944.2-201ENST00000429866 1242 ntBASIC5.93□□□□□ -1.46
CASP1P29466 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.93□□□□□ -1.46
CASP1P29466 SUMO2P8-201ENST00000434672 286 ntBASIC5.93□□□□□ -1.46
CASP1P29466 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.93□□□□□ -1.46
CASP1P29466 RPS26P41-201ENST00000450370 284 ntBASIC5.93□□□□□ -1.46
CASP1P29466 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.93□□□□□ -1.46
CASP1P29466 RN7SL51P-201ENST00000468230 285 ntBASIC5.93□□□□□ -1.46
CASP1P29466 AC100832.1-201ENST00000471945 383 ntBASIC5.93□□□□□ -1.46
CASP1P29466 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.93□□□□□ -1.46
CASP1P29466 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.93□□□□□ -1.46
CASP1P29466 AC022404.1-201ENST00000555320 273 ntBASIC5.93□□□□□ -1.46
CASP1P29466 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.93□□□□□ -1.46
CASP1P29466 RPL10P14-201ENST00000565265 298 ntBASIC5.93□□□□□ -1.46
CASP1P29466 MTCYBP13-201ENST00000578634 1093 ntBASIC5.93□□□□□ -1.46
CASP1P29466 SUGT1P3-202ENST00000604259 383 ntBASIC5.93□□□□□ -1.46
CASP1P29466 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CASP1P29466 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CASP1P29466 AC004158.1-201ENST00000564508 4319 ntBASIC5.93□□□□□ -1.46
CASP1P29466 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.93□□□□□ -1.46
CASP1P29466 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CASP1P29466 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CASP1P29466 AC004817.4-201ENST00000602396 3625 ntBASIC5.93□□□□□ -1.46
CASP1P29466 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CASP1P29466 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.93□□□□□ -1.46
CASP1P29466 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CASP1P29466 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
CASP1P29466 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CASP1P29466 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
CASP1P29466 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
CASP1P29466 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CASP1P29466 RNA5SP242-201ENST00000364171 118 ntBASIC5.92□□□□□ -1.46
CASP1P29466 RPL35AP24-201ENST00000413846 330 ntBASIC5.92□□□□□ -1.46
CASP1P29466 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.92□□□□□ -1.46
CASP1P29466 AC079807.1-201ENST00000429993 481 ntBASIC5.92□□□□□ -1.46
CASP1P29466 RPL12P17-201ENST00000432393 498 ntBASIC5.92□□□□□ -1.46
CASP1P29466 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.92□□□□□ -1.46
CASP1P29466 PCNPP2-201ENST00000441651 455 ntBASIC5.92□□□□□ -1.46
CASP1P29466 AC016772.1-201ENST00000444170 1261 ntBASIC5.92□□□□□ -1.46
CASP1P29466 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.92□□□□□ -1.46
CASP1P29466 OR52E3P-201ENST00000452083 936 ntBASIC5.92□□□□□ -1.46
CASP1P29466 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.92□□□□□ -1.46
CASP1P29466 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.92□□□□□ -1.46
CASP1P29466 CBX1P5-201ENST00000475330 559 ntBASIC5.92□□□□□ -1.46
CASP1P29466 CR383656.1-201ENST00000484916 377 ntBASIC5.92□□□□□ -1.46
CASP1P29466 RN7SL423P-201ENST00000486202 304 ntBASIC5.92□□□□□ -1.46
CASP1P29466 RN7SL814P-201ENST00000487715 300 ntBASIC5.92□□□□□ -1.46
CASP1P29466 NIFKP7-201ENST00000503365 834 ntBASIC5.92□□□□□ -1.46
CASP1P29466 RNU6-941P-201ENST00000516346 108 ntBASIC5.92□□□□□ -1.46
CASP1P29466 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.92□□□□□ -1.46
CASP1P29466 YWHABP2-201ENST00000540201 713 ntBASIC5.92□□□□□ -1.46
CASP1P29466 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.92□□□□□ -1.46
CASP1P29466 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.92□□□□□ -1.46
CASP1P29466 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.92□□□□□ -1.46
CASP1P29466 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CASP1P29466 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CASP1P29466 AC106730.2-201ENST00000566641 540 ntBASIC5.92□□□□□ -1.46
CASP1P29466 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CASP1P29466 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.92□□□□□ -1.46
CASP1P29466 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.92□□□□□ -1.46
CASP1P29466 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.92□□□□□ -1.46
CASP1P29466 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.92□□□□□ -1.46
CASP1P29466 AC007204.2-201ENST00000615022 616 ntBASIC5.92□□□□□ -1.46
CASP1P29466 MIR6839-201ENST00000620425 113 ntBASIC5.92□□□□□ -1.46
CASP1P29466 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.92□□□□□ -1.46
CASP1P29466 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.92□□□□□ -1.46
CASP1P29466 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
CASP1P29466 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CASP1P29466 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CASP1P29466 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CASP1P29466 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CASP1P29466 AC130360.2-201ENST00000533477 1556 ntBASIC5.92□□□□□ -1.46
CASP1P29466 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
CASP1P29466 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CASP1P29466 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
CASP1P29466 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.92□□□□□ -1.46
CASP1P29466 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CASP1P29466 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CASP1P29466 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC5.91□□□□□ -1.46
CASP1P29466 AC073136.1-201ENST00000449426 2884 ntBASIC5.91□□□□□ -1.46
CASP1P29466 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CASP1P29466 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.91□□□□□ -1.46
CASP1P29466 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.91□□□□□ -1.46
CASP1P29466 AL391422.1-201ENST00000402155 436 ntBASIC5.91□□□□□ -1.46
CASP1P29466 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.91□□□□□ -1.46
CASP1P29466 SDHDP6-201ENST00000414693 480 ntBASIC5.91□□□□□ -1.46
CASP1P29466 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.91□□□□□ -1.46
CASP1P29466 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms