Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.16□□□□□ -1.42
MMP3P08254 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
MMP3P08254 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
MMP3P08254 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
MMP3P08254 AL449283.1-201ENST00000602631 3403 ntBASIC6.16□□□□□ -1.42
MMP3P08254 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC6.16□□□□□ -1.42
MMP3P08254 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
MMP3P08254 RPL23P2-201ENST00000320371 421 ntBASIC6.16□□□□□ -1.42
MMP3P08254 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
MMP3P08254 RNA5SP326-201ENST00000363209 110 ntBASIC6.16□□□□□ -1.42
MMP3P08254 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.16□□□□□ -1.42
MMP3P08254 MIR765-201ENST00000390226 114 ntBASIC6.16□□□□□ -1.42
MMP3P08254 RPL23AP17-201ENST00000401064 499 ntBASIC6.16□□□□□ -1.42
MMP3P08254 RN7SKP213-201ENST00000410746 298 ntBASIC6.16□□□□□ -1.42
MMP3P08254 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC6.16□□□□□ -1.42
MMP3P08254 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.16□□□□□ -1.42
MMP3P08254 FAM96AP1-201ENST00000430879 482 ntBASIC6.16□□□□□ -1.42
MMP3P08254 MRPS21P3-201ENST00000436696 262 ntBASIC6.16□□□□□ -1.42
MMP3P08254 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.16□□□□□ -1.42
MMP3P08254 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.16□□□□□ -1.42
MMP3P08254 SEPT7P6-201ENST00000469999 1143 ntBASIC6.16□□□□□ -1.42
MMP3P08254 FTH1P8-201ENST00000498161 514 ntBASIC6.16□□□□□ -1.42
MMP3P08254 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.16□□□□□ -1.42
MMP3P08254 AC147055.3-201ENST00000510547 851 ntBASIC6.16□□□□□ -1.42
MMP3P08254 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC6.16□□□□□ -1.42
MMP3P08254 PMS2P3-207ENST00000529061 717 ntBASIC6.16□□□□□ -1.42
MMP3P08254 OR11J2P-201ENST00000555298 907 ntBASIC6.16□□□□□ -1.42
MMP3P08254 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
MMP3P08254 AL049874.4-201ENST00000557593 255 ntBASIC6.16□□□□□ -1.42
MMP3P08254 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.16□□□□□ -1.42
MMP3P08254 AL731537.2-201ENST00000561565 951 ntBASIC6.16□□□□□ -1.42
MMP3P08254 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.16□□□□□ -1.42
MMP3P08254 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
MMP3P08254 SETP3-201ENST00000581726 813 ntBASIC6.16□□□□□ -1.42
MMP3P08254 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
MMP3P08254 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.16□□□□□ -1.42
MMP3P08254 AC024940.4-201ENST00000605507 246 ntBASIC6.16□□□□□ -1.42
MMP3P08254 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
MMP3P08254 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.16□□□□□ -1.42
MMP3P08254 AC068870.2-201ENST00000620635 389 ntBASIC6.16□□□□□ -1.42
MMP3P08254 AL391262.2-201ENST00000622466 494 ntBASIC6.16□□□□□ -1.42
MMP3P08254 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.16□□□□□ -1.42
MMP3P08254 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.16□□□□□ -1.42
MMP3P08254 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
MMP3P08254 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
MMP3P08254 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.16□□□□□ -1.42
MMP3P08254 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.16□□□□□ -1.42
MMP3P08254 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
MMP3P08254 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.16□□□□□ -1.42
MMP3P08254 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.15□□□□□ -1.42
MMP3P08254 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
MMP3P08254 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.15□□□□□ -1.42
MMP3P08254 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
MMP3P08254 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
MMP3P08254 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
MMP3P08254 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
MMP3P08254 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
MMP3P08254 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
MMP3P08254 SNORA67-201ENST00000384423 137 ntBASIC6.15□□□□□ -1.42
MMP3P08254 AL133388.1-201ENST00000404509 287 ntBASIC6.15□□□□□ -1.42
MMP3P08254 AC096921.1-201ENST00000411661 375 ntBASIC6.15□□□□□ -1.42
MMP3P08254 SRSF1P1-201ENST00000424058 520 ntBASIC6.15□□□□□ -1.42
MMP3P08254 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC6.15□□□□□ -1.42
MMP3P08254 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.15□□□□□ -1.42
MMP3P08254 TMEM183AP1-205ENST00000432739 290 ntBASIC6.15□□□□□ -1.42
MMP3P08254 USP24P1-201ENST00000433802 779 ntBASIC6.15□□□□□ -1.42
MMP3P08254 MAPRE1P3-201ENST00000435438 796 ntBASIC6.15□□□□□ -1.42
MMP3P08254 AL390879.1-201ENST00000439143 386 ntBASIC6.15□□□□□ -1.42
MMP3P08254 NANOGP9-201ENST00000439890 892 ntBASIC6.15□□□□□ -1.42
MMP3P08254 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.15□□□□□ -1.42
MMP3P08254 RPL7AP6-201ENST00000477943 801 ntBASIC6.15□□□□□ -1.42
MMP3P08254 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
MMP3P08254 AC022832.1-201ENST00000530718 645 ntBASIC6.15□□□□□ -1.42
MMP3P08254 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.15□□□□□ -1.42
MMP3P08254 AC106730.2-201ENST00000566641 540 ntBASIC6.15□□□□□ -1.42
MMP3P08254 MIR3691-201ENST00000578066 90 ntBASIC6.15□□□□□ -1.42
MMP3P08254 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC6.15□□□□□ -1.42
MMP3P08254 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.15□□□□□ -1.42
MMP3P08254 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC6.15□□□□□ -1.42
MMP3P08254 AC109583.2-201ENST00000617367 129 ntBASIC6.15□□□□□ -1.42
MMP3P08254 AC106730.3-201ENST00000624568 641 ntBASIC6.15□□□□□ -1.42
MMP3P08254 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.15□□□□□ -1.42
MMP3P08254 AC132825.8-201ENST00000640783 297 ntBASIC6.15□□□□□ -1.42
MMP3P08254 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
MMP3P08254 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
MMP3P08254 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.15□□□□□ -1.43
MMP3P08254 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
MMP3P08254 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
MMP3P08254 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
MMP3P08254 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
MMP3P08254 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
MMP3P08254 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.15□□□□□ -1.43
MMP3P08254 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.14□□□□□ -1.43
MMP3P08254 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
MMP3P08254 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
MMP3P08254 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.14□□□□□ -1.43
MMP3P08254 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
MMP3P08254 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.14□□□□□ -1.43
MMP3P08254 AL137141.1-201ENST00000624622 4836 ntBASIC6.14□□□□□ -1.43
MMP3P08254 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 150.7 ms