Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DPB1P04440 MT-RNR2-201ENST00000387347 1559 ntBASIC4.9□□□□□ -1.63
HLA-DPB1P04440 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
HLA-DPB1P04440 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DPB1P04440 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
HLA-DPB1P04440 AL603750.1-201ENST00000624216 1717 ntBASIC4.89□□□□□ -1.63
HLA-DPB1P04440 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
HLA-DPB1P04440 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DPB1P04440 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DPB1P04440 AC125336.1-201ENST00000508893 2827 ntBASIC4.89□□□□□ -1.63
HLA-DPB1P04440 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DPB1P04440 AC007842.1-201ENST00000597336 2039 ntBASIC4.89□□□□□ -1.63
HLA-DPB1P04440 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DPB1P04440 AC099654.3-201ENST00000447087 1546 ntBASIC4.89□□□□□ -1.63
HLA-DPB1P04440 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DPB1P04440 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DPB1P04440 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HLA-DPB1P04440 AC023490.2-201ENST00000359859 470 ntBASIC4.89□□□□□ -1.63
HLA-DPB1P04440 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.89□□□□□ -1.63
HLA-DPB1P04440 AL009179.1-201ENST00000406085 265 ntBASIC4.89□□□□□ -1.63
HLA-DPB1P04440 MIR1282-201ENST00000408865 101 ntBASIC4.89□□□□□ -1.63
HLA-DPB1P04440 CTSL3P-202ENST00000412179 788 ntBASIC4.89□□□□□ -1.63
HLA-DPB1P04440 PCNPP2-201ENST00000441651 455 ntBASIC4.89□□□□□ -1.63
HLA-DPB1P04440 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DPB1P04440 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DPB1P04440 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.89□□□□□ -1.63
HLA-DPB1P04440 AC245028.2-201ENST00000458673 253 ntBASIC4.89□□□□□ -1.63
HLA-DPB1P04440 RPS4XP12-201ENST00000461747 709 ntBASIC4.89□□□□□ -1.63
HLA-DPB1P04440 AC009120.1-201ENST00000493458 473 ntBASIC4.89□□□□□ -1.63
HLA-DPB1P04440 RPS24P16-201ENST00000497294 392 ntBASIC4.89□□□□□ -1.63
HLA-DPB1P04440 IGBP1P4-201ENST00000503202 879 ntBASIC4.89□□□□□ -1.63
HLA-DPB1P04440 IMPA1P1-201ENST00000510718 842 ntBASIC4.89□□□□□ -1.63
HLA-DPB1P04440 HMGN1P9-201ENST00000515212 298 ntBASIC4.89□□□□□ -1.63
HLA-DPB1P04440 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DPB1P04440 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DPB1P04440 AC027369.5-201ENST00000533838 755 ntBASIC4.89□□□□□ -1.63
HLA-DPB1P04440 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DPB1P04440 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DPB1P04440 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC4.89□□□□□ -1.63
HLA-DPB1P04440 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DPB1P04440 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DPB1P04440 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DPB1P04440 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.89□□□□□ -1.63
HLA-DPB1P04440 AC010266.2-201ENST00000564741 3255 ntBASIC4.89□□□□□ -1.63
HLA-DPB1P04440 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DPB1P04440 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
HLA-DPB1P04440 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
HLA-DPB1P04440 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DPB1P04440 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DPB1P04440 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC4.89□□□□□ -1.63
HLA-DPB1P04440 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
HLA-DPB1P04440 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DPB1P04440 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DPB1P04440 HSPA8P14-201ENST00000552265 1805 ntBASIC4.88□□□□□ -1.63
HLA-DPB1P04440 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
HLA-DPB1P04440 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DPB1P04440 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
HLA-DPB1P04440 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.88□□□□□ -1.63
HLA-DPB1P04440 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DPB1P04440 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
HLA-DPB1P04440 GAPDHP24-201ENST00000328713 983 ntBASIC4.88□□□□□ -1.63
HLA-DPB1P04440 AL159987.1-201ENST00000347911 293 ntBASIC4.88□□□□□ -1.63
HLA-DPB1P04440 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DPB1P04440 RNA5SP510-201ENST00000364697 99 ntBASIC4.88□□□□□ -1.63
HLA-DPB1P04440 FIG4-202ENST00000368941 791 ntTSL 3 BASIC4.88□□□□□ -1.63
HLA-DPB1P04440 OR7E101P-201ENST00000400428 513 ntBASIC4.88□□□□□ -1.63
HLA-DPB1P04440 LSM5-203ENST00000409782 649 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-DPB1P04440 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.88□□□□□ -1.63
HLA-DPB1P04440 VN1R3-201ENST00000418822 919 ntBASIC4.88□□□□□ -1.63
HLA-DPB1P04440 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC4.88□□□□□ -1.63
HLA-DPB1P04440 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DPB1P04440 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.88□□□□□ -1.63
HLA-DPB1P04440 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC4.88□□□□□ -1.63
HLA-DPB1P04440 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC4.88□□□□□ -1.63
HLA-DPB1P04440 AC022215.1-201ENST00000481770 362 ntBASIC4.88□□□□□ -1.63
HLA-DPB1P04440 RPS12P31-201ENST00000491419 398 ntBASIC4.88□□□□□ -1.63
HLA-DPB1P04440 NENFP3-201ENST00000503735 313 ntBASIC4.88□□□□□ -1.63
HLA-DPB1P04440 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.88□□□□□ -1.63
HLA-DPB1P04440 DUTP7-201ENST00000507982 486 ntBASIC4.88□□□□□ -1.63
HLA-DPB1P04440 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.88□□□□□ -1.63
HLA-DPB1P04440 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DPB1P04440 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DPB1P04440 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.88□□□□□ -1.63
HLA-DPB1P04440 AC130364.2-201ENST00000528639 604 ntBASIC4.88□□□□□ -1.63
HLA-DPB1P04440 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC4.88□□□□□ -1.63
HLA-DPB1P04440 GNG2-208ENST00000554875 430 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-DPB1P04440 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.88□□□□□ -1.63
HLA-DPB1P04440 AC090888.3-201ENST00000558917 509 ntBASIC4.88□□□□□ -1.63
HLA-DPB1P04440 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.88□□□□□ -1.63
HLA-DPB1P04440 MIR4472-2-201ENST00000582069 67 ntBASIC4.88□□□□□ -1.63
HLA-DPB1P04440 AC100767.2-201ENST00000604840 693 ntBASIC4.88□□□□□ -1.63
HLA-DPB1P04440 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-DPB1P04440 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-DPB1P04440 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DPB1P04440 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-DPB1P04440 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DPB1P04440 MRE11P1-201ENST00000464884 2127 ntBASIC4.88□□□□□ -1.63
HLA-DPB1P04440 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-DPB1P04440 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DPB1P04440 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms