Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.3□□□□□ -1.4
COL2A1P02458 AC073869.8-201ENST00000641806 335 ntBASIC6.3□□□□□ -1.4
COL2A1P02458 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL2A1P02458 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.3□□□□□ -1.4
COL2A1P02458 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL2A1P02458 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.3□□□□□ -1.4
COL2A1P02458 AC100757.1-201ENST00000616872 1835 ntBASIC6.3□□□□□ -1.4
COL2A1P02458 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
COL2A1P02458 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL2A1P02458 KYNUP3-201ENST00000574386 1341 ntBASIC6.3□□□□□ -1.4
COL2A1P02458 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.3□□□□□ -1.4
COL2A1P02458 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.3□□□□□ -1.4
COL2A1P02458 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL2A1P02458 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC6.3□□□□□ -1.4
COL2A1P02458 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC6.29□□□□□ -1.4
COL2A1P02458 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL2A1P02458 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL2A1P02458 RNU4-4P-201ENST00000364588 130 ntBASIC6.29□□□□□ -1.4
COL2A1P02458 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL2A1P02458 RNA5SP87-201ENST00000384155 118 ntBASIC6.29□□□□□ -1.4
COL2A1P02458 MIR105-1-201ENST00000385222 81 ntBASIC6.29□□□□□ -1.4
COL2A1P02458 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
COL2A1P02458 AC211486.3-201ENST00000412694 621 ntBASIC6.29□□□□□ -1.4
COL2A1P02458 BX679664.2-201ENST00000439282 283 ntBASIC6.29□□□□□ -1.4
COL2A1P02458 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC6.29□□□□□ -1.4
COL2A1P02458 OR4A17P-201ENST00000526032 904 ntBASIC6.29□□□□□ -1.4
COL2A1P02458 OR5AZ1P-201ENST00000527448 943 ntBASIC6.29□□□□□ -1.4
COL2A1P02458 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC6.29□□□□□ -1.4
COL2A1P02458 AC079075.1-201ENST00000559543 878 ntBASIC6.29□□□□□ -1.4
COL2A1P02458 PDCD6IPP2-207ENST00000566321 1069 ntBASIC6.29□□□□□ -1.4
COL2A1P02458 AC005252.1-201ENST00000604518 1063 ntBASIC6.29□□□□□ -1.4
COL2A1P02458 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
COL2A1P02458 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
COL2A1P02458 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL2A1P02458 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
COL2A1P02458 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.29□□□□□ -1.4
COL2A1P02458 AC114774.1-201ENST00000507410 1770 ntBASIC6.29□□□□□ -1.4
COL2A1P02458 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL2A1P02458 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL2A1P02458 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL2A1P02458 AL356317.1-201ENST00000396110 1436 ntBASIC6.29□□□□□ -1.4
COL2A1P02458 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL2A1P02458 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL2A1P02458 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.29□□□□□ -1.4
COL2A1P02458 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
COL2A1P02458 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
COL2A1P02458 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.28□□□□□ -1.4
COL2A1P02458 AC010132.2-201ENST00000295493 1043 ntBASIC6.28□□□□□ -1.4
COL2A1P02458 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.28□□□□□ -1.4
COL2A1P02458 U3.10-201ENST00000364459 214 ntBASIC6.28□□□□□ -1.4
COL2A1P02458 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL2A1P02458 RBMY2QP-201ENST00000429799 1147 ntBASIC6.28□□□□□ -1.4
COL2A1P02458 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC6.28□□□□□ -1.4
COL2A1P02458 TPT1P13-201ENST00000449760 499 ntBASIC6.28□□□□□ -1.4
COL2A1P02458 RPS29P33-201ENST00000456717 146 ntBASIC6.28□□□□□ -1.4
COL2A1P02458 AC097484.1-201ENST00000471148 389 ntBASIC6.28□□□□□ -1.4
COL2A1P02458 IGLV2-34-201ENST00000490007 283 ntBASIC6.28□□□□□ -1.4
COL2A1P02458 RN7SL591P-201ENST00000496150 292 ntBASIC6.28□□□□□ -1.4
COL2A1P02458 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.28□□□□□ -1.4
COL2A1P02458 RN7SKP67-201ENST00000515905 235 ntBASIC6.28□□□□□ -1.4
COL2A1P02458 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC6.28□□□□□ -1.4
COL2A1P02458 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC6.28□□□□□ -1.4
COL2A1P02458 AC063949.1-201ENST00000552900 865 ntBASIC6.28□□□□□ -1.4
COL2A1P02458 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.28□□□□□ -1.4
COL2A1P02458 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.28□□□□□ -1.4
COL2A1P02458 AC099494.2-201ENST00000623371 978 ntBASIC6.28□□□□□ -1.4
COL2A1P02458 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC6.28□□□□□ -1.4
COL2A1P02458 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC6.28□□□□□ -1.4
COL2A1P02458 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
COL2A1P02458 AC079097.1-201ENST00000512187 1399 ntBASIC6.28□□□□□ -1.4
COL2A1P02458 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL2A1P02458 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL2A1P02458 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL2A1P02458 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
COL2A1P02458 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.28□□□□□ -1.4
COL2A1P02458 AC016745.2-201ENST00000608834 3443 ntBASIC6.28□□□□□ -1.4
COL2A1P02458 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
COL2A1P02458 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.28□□□□□ -1.4
COL2A1P02458 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL2A1P02458 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
COL2A1P02458 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL2A1P02458 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL2A1P02458 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.28□□□□□ -1.4
COL2A1P02458 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.28□□□□□ -1.4
COL2A1P02458 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.28□□□□□ -1.4
COL2A1P02458 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
COL2A1P02458 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
COL2A1P02458 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL2A1P02458 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.28□□□□□ -1.4
COL2A1P02458 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL2A1P02458 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC6.28□□□□□ -1.4
COL2A1P02458 RPS4XP16-201ENST00000427198 791 ntBASIC6.28□□□□□ -1.4
COL2A1P02458 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.28□□□□□ -1.4
COL2A1P02458 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL2A1P02458 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.28□□□□□ -1.4
COL2A1P02458 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.28□□□□□ -1.4
COL2A1P02458 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
COL2A1P02458 AC105233.1-201ENST00000498840 781 ntBASIC6.28□□□□□ -1.4
COL2A1P02458 SCARNA20.4-201ENST00000516969 131 ntBASIC6.28□□□□□ -1.4
COL2A1P02458 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms