Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.72□□□□□ -1.49
PDGFBP01127 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.72□□□□□ -1.49
PDGFBP01127 AP001542.1-201ENST00000591314 200 ntBASIC5.72□□□□□ -1.49
PDGFBP01127 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.72□□□□□ -1.49
PDGFBP01127 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
PDGFBP01127 LRRC37A16P-202ENST00000586022 3725 ntBASIC5.72□□□□□ -1.49
PDGFBP01127 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
PDGFBP01127 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PDGFBP01127 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.72□□□□□ -1.49
PDGFBP01127 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDGFBP01127 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDGFBP01127 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.72□□□□□ -1.49
PDGFBP01127 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
PDGFBP01127 AC018809.2-201ENST00000602436 3823 ntBASIC5.72□□□□□ -1.49
PDGFBP01127 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
PDGFBP01127 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC5.72□□□□□ -1.49
PDGFBP01127 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
PDGFBP01127 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
PDGFBP01127 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
PDGFBP01127 MAPK10-344ENST00000641718 3746 ntBASIC5.71□□□□□ -1.49
PDGFBP01127 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.71□□□□□ -1.5
PDGFBP01127 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PDGFBP01127 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PDGFBP01127 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PDGFBP01127 MIR133B-201ENST00000362210 119 ntBASIC5.71□□□□□ -1.5
PDGFBP01127 RNA5SP123-201ENST00000363244 119 ntBASIC5.71□□□□□ -1.5
PDGFBP01127 SNORA67-201ENST00000384423 137 ntBASIC5.71□□□□□ -1.5
PDGFBP01127 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.71□□□□□ -1.5
PDGFBP01127 RNU4-64P-201ENST00000410795 131 ntBASIC5.71□□□□□ -1.5
PDGFBP01127 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.71□□□□□ -1.5
PDGFBP01127 MYL6P5-201ENST00000412707 459 ntBASIC5.71□□□□□ -1.5
PDGFBP01127 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.71□□□□□ -1.5
PDGFBP01127 RPL12P43-201ENST00000420608 499 ntBASIC5.71□□□□□ -1.5
PDGFBP01127 OR6C71P-201ENST00000432580 913 ntBASIC5.71□□□□□ -1.5
PDGFBP01127 UBE2V2P1-201ENST00000434717 398 ntBASIC5.71□□□□□ -1.5
PDGFBP01127 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.71□□□□□ -1.5
PDGFBP01127 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.71□□□□□ -1.5
PDGFBP01127 RN7SL447P-201ENST00000494711 245 ntBASIC5.71□□□□□ -1.5
PDGFBP01127 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.71□□□□□ -1.5
PDGFBP01127 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PDGFBP01127 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.71□□□□□ -1.5
PDGFBP01127 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.71□□□□□ -1.5
PDGFBP01127 MIR2117-201ENST00000516780 80 ntBASIC5.71□□□□□ -1.5
PDGFBP01127 RN7SKP147-201ENST00000517154 244 ntBASIC5.71□□□□□ -1.5
PDGFBP01127 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.71□□□□□ -1.5
PDGFBP01127 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.71□□□□□ -1.5
PDGFBP01127 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.71□□□□□ -1.5
PDGFBP01127 AC127381.1-201ENST00000555979 939 ntBASIC5.71□□□□□ -1.5
PDGFBP01127 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.71□□□□□ -1.5
PDGFBP01127 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.71□□□□□ -1.5
PDGFBP01127 AC209154.1-201ENST00000582156 337 ntBASIC5.71□□□□□ -1.5
PDGFBP01127 SS18L2P2-201ENST00000583960 235 ntBASIC5.71□□□□□ -1.5
PDGFBP01127 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.71□□□□□ -1.5
PDGFBP01127 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.71□□□□□ -1.5
PDGFBP01127 AP005212.4-201ENST00000614206 710 ntBASIC5.71□□□□□ -1.5
PDGFBP01127 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.71□□□□□ -1.5
PDGFBP01127 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
PDGFBP01127 MIR7641-1-201ENST00000627518 61 ntBASIC5.71□□□□□ -1.5
PDGFBP01127 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.71□□□□□ -1.5
PDGFBP01127 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.71□□□□□ -1.5
PDGFBP01127 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
PDGFBP01127 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
PDGFBP01127 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
PDGFBP01127 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
PDGFBP01127 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
PDGFBP01127 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PDGFBP01127 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
PDGFBP01127 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
PDGFBP01127 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.71□□□□□ -1.5
PDGFBP01127 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.71□□□□□ -1.5
PDGFBP01127 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
PDGFBP01127 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PDGFBP01127 AOX3P-204ENST00000491025 2107 ntBASIC5.71□□□□□ -1.5
PDGFBP01127 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
PDGFBP01127 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PDGFBP01127 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDGFBP01127 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDGFBP01127 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDGFBP01127 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PDGFBP01127 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.7□□□□□ -1.5
PDGFBP01127 MTND5P23-201ENST00000430812 1655 ntBASIC5.7□□□□□ -1.5
PDGFBP01127 AP004607.3-201ENST00000530354 3915 ntBASIC5.7□□□□□ -1.5
PDGFBP01127 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.7□□□□□ -1.5
PDGFBP01127 RNVU1-6-201ENST00000364688 164 ntBASIC5.7□□□□□ -1.5
PDGFBP01127 RNU2-22P-201ENST00000411266 212 ntBASIC5.7□□□□□ -1.5
PDGFBP01127 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.7□□□□□ -1.5
PDGFBP01127 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.7□□□□□ -1.5
PDGFBP01127 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.7□□□□□ -1.5
PDGFBP01127 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.7□□□□□ -1.5
PDGFBP01127 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.7□□□□□ -1.5
PDGFBP01127 RPL7P56-201ENST00000429441 717 ntBASIC5.7□□□□□ -1.5
PDGFBP01127 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.7□□□□□ -1.5
PDGFBP01127 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC5.7□□□□□ -1.5
PDGFBP01127 AC092324.1-201ENST00000468671 324 ntBASIC5.7□□□□□ -1.5
PDGFBP01127 STRADBP1-201ENST00000478954 1281 ntBASIC5.7□□□□□ -1.5
PDGFBP01127 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.7□□□□□ -1.5
PDGFBP01127 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.7□□□□□ -1.5
PDGFBP01127 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.7□□□□□ -1.5
PDGFBP01127 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.7□□□□□ -1.5
PDGFBP01127 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms