Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.36□□□□□ -1.55
SNX3O60493 RNA5SP198-201ENST00000410376 127 ntBASIC5.36□□□□□ -1.55
SNX3O60493 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.36□□□□□ -1.55
SNX3O60493 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC5.36□□□□□ -1.55
SNX3O60493 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.36□□□□□ -1.55
SNX3O60493 FAM204CP-201ENST00000424489 642 ntBASIC5.36□□□□□ -1.55
SNX3O60493 OR2AH1P-201ENST00000425717 928 ntBASIC5.36□□□□□ -1.55
SNX3O60493 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC5.36□□□□□ -1.55
SNX3O60493 KCTD9P1-201ENST00000430462 1167 ntBASIC5.36□□□□□ -1.55
SNX3O60493 NDUFA5P1-201ENST00000433858 341 ntBASIC5.36□□□□□ -1.55
SNX3O60493 AL353662.1-201ENST00000439099 327 ntBASIC5.36□□□□□ -1.55
SNX3O60493 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.36□□□□□ -1.55
SNX3O60493 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.36□□□□□ -1.55
SNX3O60493 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.36□□□□□ -1.55
SNX3O60493 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.36□□□□□ -1.55
SNX3O60493 AL034369.1-201ENST00000453808 477 ntBASIC5.36□□□□□ -1.55
SNX3O60493 CTSLP6-201ENST00000458273 1002 ntBASIC5.36□□□□□ -1.55
SNX3O60493 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.36□□□□□ -1.55
SNX3O60493 HESX1-202ENST00000473921 757 ntTSL 5 BASIC5.36□□□□□ -1.55
SNX3O60493 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.36□□□□□ -1.55
SNX3O60493 AC009120.1-201ENST00000493458 473 ntBASIC5.36□□□□□ -1.55
SNX3O60493 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.36□□□□□ -1.55
SNX3O60493 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.36□□□□□ -1.55
SNX3O60493 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SNX3O60493 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.36□□□□□ -1.55
SNX3O60493 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.36□□□□□ -1.55
SNX3O60493 AC005244.1-201ENST00000582566 339 ntBASIC5.36□□□□□ -1.55
SNX3O60493 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.36□□□□□ -1.55
SNX3O60493 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.36□□□□□ -1.55
SNX3O60493 AP000769.2-201ENST00000602344 396 ntBASIC5.36□□□□□ -1.55
SNX3O60493 RPL12P48-201ENST00000605620 304 ntBASIC5.36□□□□□ -1.55
SNX3O60493 AC022106.2-201ENST00000620114 757 ntBASIC5.36□□□□□ -1.55
SNX3O60493 AC015871.5-202ENST00000623252 701 ntBASIC5.36□□□□□ -1.55
SNX3O60493 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
SNX3O60493 AC093909.5-201ENST00000621839 1799 ntBASIC5.36□□□□□ -1.55
SNX3O60493 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SNX3O60493 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SNX3O60493 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.36□□□□□ -1.55
SNX3O60493 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SNX3O60493 AC005261.2-201ENST00000593427 4258 ntBASIC5.35□□□□□ -1.55
SNX3O60493 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.35□□□□□ -1.55
SNX3O60493 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SNX3O60493 AC093849.1-201ENST00000563631 2209 ntBASIC5.35□□□□□ -1.55
SNX3O60493 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SNX3O60493 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SNX3O60493 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
SNX3O60493 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SNX3O60493 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
SNX3O60493 MT-RNR1-201ENST00000389680 954 ntBASIC5.35□□□□□ -1.55
SNX3O60493 ARAFP1-201ENST00000422172 605 ntBASIC5.35□□□□□ -1.55
SNX3O60493 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC5.35□□□□□ -1.55
SNX3O60493 AC124944.2-201ENST00000429866 1242 ntBASIC5.35□□□□□ -1.55
SNX3O60493 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SNX3O60493 MTND2P3-201ENST00000452458 470 ntBASIC5.35□□□□□ -1.55
SNX3O60493 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.35□□□□□ -1.55
SNX3O60493 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SNX3O60493 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.35□□□□□ -1.55
SNX3O60493 GOLGA5P1-201ENST00000507317 980 ntBASIC5.35□□□□□ -1.55
SNX3O60493 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.35□□□□□ -1.55
SNX3O60493 AC104997.1-201ENST00000519761 717 ntBASIC5.35□□□□□ -1.55
SNX3O60493 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SNX3O60493 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC5.35□□□□□ -1.55
SNX3O60493 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.35□□□□□ -1.55
SNX3O60493 BNIP3P1-201ENST00000547295 580 ntBASIC5.35□□□□□ -1.55
SNX3O60493 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.35□□□□□ -1.55
SNX3O60493 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC5.35□□□□□ -1.55
SNX3O60493 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.35□□□□□ -1.55
SNX3O60493 HMGN2P47-201ENST00000559378 272 ntBASIC5.35□□□□□ -1.55
SNX3O60493 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SNX3O60493 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.35□□□□□ -1.55
SNX3O60493 AC007346.1-201ENST00000569208 867 ntBASIC5.35□□□□□ -1.55
SNX3O60493 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC5.35□□□□□ -1.55
SNX3O60493 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC5.35□□□□□ -1.55
SNX3O60493 AP005262.1-201ENST00000582646 997 ntBASIC5.35□□□□□ -1.55
SNX3O60493 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.35□□□□□ -1.55
SNX3O60493 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.35□□□□□ -1.55
SNX3O60493 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.35□□□□□ -1.55
SNX3O60493 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.35□□□□□ -1.55
SNX3O60493 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.35□□□□□ -1.55
SNX3O60493 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.35□□□□□ -1.55
SNX3O60493 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.35□□□□□ -1.55
SNX3O60493 AL512430.4-201ENST00000603085 613 ntBASIC5.35□□□□□ -1.55
SNX3O60493 AL021368.1-201ENST00000607490 540 ntBASIC5.35□□□□□ -1.55
SNX3O60493 AC037198.3-201ENST00000616754 526 ntBASIC5.35□□□□□ -1.55
SNX3O60493 AC015914.2-201ENST00000618167 288 ntBASIC5.35□□□□□ -1.55
SNX3O60493 CLUHP10-201ENST00000631979 980 ntBASIC5.35□□□□□ -1.55
SNX3O60493 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.35□□□□□ -1.55
SNX3O60493 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.35□□□□□ -1.55
SNX3O60493 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
SNX3O60493 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.35□□□□□ -1.55
SNX3O60493 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.35□□□□□ -1.55
SNX3O60493 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
SNX3O60493 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SNX3O60493 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
SNX3O60493 AC097063.1-201ENST00000426714 1797 ntBASIC5.34□□□□□ -1.55
SNX3O60493 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SNX3O60493 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.34□□□□□ -1.55
SNX3O60493 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
SNX3O60493 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.34□□□□□ -1.55
SNX3O60493 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms